Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1192
         (425 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B pr...    87   7e-18
BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p pro...    87   7e-18
AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p pro...    87   7e-18
AL031581-5|CAA20892.1|  115|Drosophila melanogaster EG:115C2.7,F...    87   7e-18
AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD, ...    87   7e-18
AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC, ...    87   7e-18
AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB, ...    87   7e-18
AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA, ...    87   7e-18

>U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B
           protein protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p
           protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p
           protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AL031581-5|CAA20892.1|  115|Drosophila melanogaster
           EG:115C2.7,FBgn0002579;RpL36 protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD,
           isoform D protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC,
           isoform C protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB,
           isoform B protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA,
           isoform A protein.
          Length = 115

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 24  MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 200
           MA R+E+A+GL KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1   MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59

Query: 201 HAQYEKRAME 230
           HA YEKR ME
Sbjct: 60  HAPYEKRTME 69



 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 245 KRQGALKFLKRRLGTHIRAKRKREELSNVLAQMRK 349
           K + ALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75  KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,855,338
Number of Sequences: 53049
Number of extensions: 273921
Number of successful extensions: 707
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)