Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1191
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069653-1|AAH69653.1|  605|Homo sapiens solute carrier family 2...    30   9.6  
AL834225-1|CAD38903.1|  316|Homo sapiens hypothetical protein pr...    30   9.6  
AK096171-1|BAC04715.1|  352|Homo sapiens protein ( Homo sapiens ...    30   9.6  
AF520706-1|AAM76072.1|  558|Homo sapiens K-dependent Na/Ca excha...    30   9.6  
AF520705-1|AAM76071.1|  586|Homo sapiens K-dependent Na/Ca excha...    30   9.6  
AF520704-1|AAM76070.1|  605|Homo sapiens K-dependent Na/Ca excha...    30   9.6  

>BC069653-1|AAH69653.1|  605|Homo sapiens solute carrier family 24
           (sodium/potassium/calcium exchanger), member 4 protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -1

Query: 577 LCITLTD*TKMSRW*RFMLIYFIRSILWI 491
           LC+T+ + +K  RW +F ++ FI + LWI
Sbjct: 420 LCVTIPNCSK-PRWEKFFMVTFITATLWI 447


>AL834225-1|CAD38903.1|  316|Homo sapiens hypothetical protein
           protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -1

Query: 577 LCITLTD*TKMSRW*RFMLIYFIRSILWI 491
           LC+T+ + +K  RW +F ++ FI + LWI
Sbjct: 131 LCVTIPNCSK-PRWEKFFMVTFITATLWI 158


>AK096171-1|BAC04715.1|  352|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38852 fis, clone MESAN2010312, weakly similar to
           Homo sapiens sodium/calcium exchanger NCKX3 (SLC24A3)
           mRNA. ).
          Length = 352

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -1

Query: 577 LCITLTD*TKMSRW*RFMLIYFIRSILWI 491
           LC+T+ + +K  RW +F ++ FI + LWI
Sbjct: 289 LCVTIPNSSK-PRWEKFFMVTFITATLWI 316


>AF520706-1|AAM76072.1|  558|Homo sapiens K-dependent Na/Ca
           exchanger NCKX4 protein.
          Length = 558

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -1

Query: 577 LCITLTD*TKMSRW*RFMLIYFIRSILWI 491
           LC+T+ + +K  RW +F ++ FI + LWI
Sbjct: 373 LCVTIPNCSK-PRWEKFFMVTFITATLWI 400


>AF520705-1|AAM76071.1|  586|Homo sapiens K-dependent Na/Ca
           exchanger NCKX4 protein.
          Length = 586

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -1

Query: 577 LCITLTD*TKMSRW*RFMLIYFIRSILWI 491
           LC+T+ + +K  RW +F ++ FI + LWI
Sbjct: 401 LCVTIPNCSK-PRWEKFFMVTFITATLWI 428


>AF520704-1|AAM76070.1|  605|Homo sapiens K-dependent Na/Ca
           exchanger NCKX4 protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -1

Query: 577 LCITLTD*TKMSRW*RFMLIYFIRSILWI 491
           LC+T+ + +K  RW +F ++ FI + LWI
Sbjct: 420 LCVTIPNCSK-PRWEKFFMVTFITATLWI 447


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,866,523
Number of Sequences: 237096
Number of extensions: 1669415
Number of successful extensions: 1980
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)