Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1191
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   2.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.1  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   6.7  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   8.9  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   8.9  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 242 VQLIEVC*VRKFNIFND 192
           VQL   C ++KFN ++D
Sbjct: 59  VQLFSECLIKKFNAYDD 75


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = +1

Query: 49  YKITKSILFKADKKMQSMSPLFTTAIILGYIDEI 150
           Y ++ +++ + D K+  + P++     L + DE+
Sbjct: 140 YALSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEV 173


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = +1

Query: 49  YKITKSILFKADKKMQSMSPLFTTAIILGYIDEI 150
           Y ++ +++ + D K+  + P++     L + DE+
Sbjct: 140 YALSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEV 173


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 242 VQLIEVC*VRKFNIFND 192
           VQL   C ++KFN ++D
Sbjct: 59  VQLFSECLIKKFNGYDD 75


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 600 RSNLRLKTTIQCIFYCLLK 656
           + NL  + +I C  YCLL+
Sbjct: 61  KGNLVNEPSITCYMYCLLE 79


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 600 RSNLRLKTTIQCIFYCLLK 656
           + NL  + +I C  YCLL+
Sbjct: 61  KGNLVNEPSITCYMYCLLE 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,977
Number of Sequences: 438
Number of extensions: 3276
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)