Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1187
(752 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 107 1e-23
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 77 2e-14
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 64 9e-11
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 61 8e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 61 8e-10
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 60 2e-09
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 56 3e-08
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 55 7e-08
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 44 2e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 38 0.012
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 36 0.027
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 35 0.082
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.11
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 33 0.33
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 33 0.33
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 32 0.43
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 30 2.3
SB_54663| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 5.4
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 7.1
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 28 7.1
SB_13530| Best HMM Match : RCSD (HMM E-Value=3.1) 28 7.1
SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07) 28 7.1
SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33) 28 7.1
SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06) 28 9.4
SB_12095| Best HMM Match : Vicilin_N (HMM E-Value=0.083) 28 9.4
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 107 bits (256), Expect = 1e-23
Identities = 55/134 (41%), Positives = 78/134 (58%)
Frame = +1
Query: 256 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGP 435
E+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+SWL KKTGP
Sbjct: 73 EKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGP 132
Query: 436 PAVEVTSAEQAKELIDANTVIVFGSFRTRAQPEPKLSFQXXXXXXXXXXXXSAMRK*SRS 615
PA ++ +A+ K+ I V V G F + K + + +S
Sbjct: 133 PAKDLATADAMKDFI-TKEVAVVGFFTDKESDAAKAFLSAADGIDDVEFGIVSDKLLPQS 191
Query: 616 WRLKMKMLCFSRTS 657
+L+ LCFSR++
Sbjct: 192 TKLRETRLCFSRSA 205
Score = 91.1 bits (216), Expect = 9e-19
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +2
Query: 41 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLA 220
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 221 PEYAKAATKL-AEKN 262
PEYAKAA +L +EK+
Sbjct: 61 PEYAKAAGQLKSEKS 75
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 26 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 193
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 194 WCGHCKSLAPEYAKAATK 247
WCGHCK LAP + + K
Sbjct: 413 WCGHCKQLAPIWDQLGEK 430
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 256 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK---K 423
+ + I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+ K
Sbjct: 433 DHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGK 490
Query: 424 KTGPPAVE 447
PA E
Sbjct: 491 AGNEPAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 81.4 bits (192), Expect = 7e-16
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2
Query: 92 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 250
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
Score = 66.9 bits (156), Expect = 2e-11
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 ESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPP 438
+ PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP
Sbjct: 226 DPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPS 285
Query: 439 AVEVTSAEQAKELI-DANTVIVFGSF 513
+ ++S + ++ + + + V + G F
Sbjct: 286 SRILSSLKAVQDFMKEKDDVTIMGFF 311
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +1
Query: 259 ESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGP 435
+ P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK++ P
Sbjct: 111 DPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDP 169
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +2
Query: 101 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 250
P L L+K NF V+ +LVEF+APWCGHCK LAPEY KAA +L
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQEL 222
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +1
Query: 268 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKKKTGPP 438
I +AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K
Sbjct: 576 IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK---- 630
Query: 439 AVEVTSAEQAKE 474
A S E+AK+
Sbjct: 631 ATVSLSKEKAKD 642
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 29 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLVLSKANFETVITTTEY-ILVEFYAPWC 199
D++ V F A L + VP +E V V+ F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 200 GHCKSLAPEYAKAATKLA-EKNLL 268
G +L P + K +KN++
Sbjct: 556 G--IALEPTFKKLGKHFRNDKNIV 577
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 77.0 bits (181), Expect = 2e-14
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 ESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 432
+ P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ G
Sbjct: 588 DPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAG 647
Query: 433 PPAVEVTSAEQ-AKELIDANTVIVFG 507
P +VE+ S + K+L DA + +V G
Sbjct: 648 PSSVEIKSVDHLEKKLDDAESNVVVG 673
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2
Query: 113 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKN 262
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L +KN
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEAL-KKN 587
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Frame = +2
Query: 116 VLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE-KNLLSN*RKLT 289
V V+ NF+ ++ T+ +L+EFYAPWCGHCKSL P+Y + KL + K+++ K+
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVI--AKMD 921
Query: 290 QLKNRISPRATVYEDTRLSNSSGMAVLSTIQVVV 391
N P +V + + + G+ ++ I +++
Sbjct: 922 ATANDAPPNFSV-QGIIIISIIGIIIIVIIMIII 954
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 319 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 432
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 64.5 bits (150), Expect = 9e-11
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 EENVLVLSKANFET-VITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEK 259
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAPE+AKAAT+L K
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKGK 129
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Frame = +1
Query: 268 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWLKKKTG 432
+K+ +DAT A Y V+GYPT+K F G S DY GGR A DII + K
Sbjct: 130 VKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAA 189
Query: 433 -----PPAVEVTSAEQAKELIDANTVIV 501
P ++ S E KE + + + V
Sbjct: 190 DSIEPPEVIQAISNEVLKEGCNEHPICV 217
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 301 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 408
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 61.3 bits (142), Expect = 8e-10
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 104 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 229
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP Y
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +1
Query: 256 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKT 429
+ S + +AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KT
Sbjct: 70 QSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKT 129
Query: 430 G 432
G
Sbjct: 130 G 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 250
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y A +L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +2
Query: 101 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKN 262
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + N
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNN 101
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2
Query: 113 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKN 262
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L +KN
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEAL-KKN 62
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +2
Query: 95 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKN 262
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA +KN
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKDKN 245
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 92 DEVP---TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKN 262
DE P T V+ L F+ + +LV FYAPWCGHCK++ PEY AA L E+
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Query: 263 L 265
+
Sbjct: 133 I 133
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 268 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTGPP 438
I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + GPP
Sbjct: 268 IAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREGPP 321
Score = 31.9 bits (69), Expect = 0.57
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 170 ILVEFYAPWCGHCKSLAPEYAKAATK 247
+++ Y CG+CK PE+A AAT+
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATE 27
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 256 EESPIKLAKVDATQEQDLAESYGVRGYPT 342
+E P LA VDAT+E L + + V GYPT
Sbjct: 131 QEIPGVLAAVDATKEAALGKRFKVEGYPT 159
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = +2
Query: 107 EENVLV--LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 241
E++ LV L ++F + TE++LV FYAPWCGHCK+ P+Y KAA
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAA 190
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 77 GLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 256
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 257 KNLLSN 274
++ N
Sbjct: 99 EDANCN 104
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 277 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 435
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 256 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 417
E++ LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 99 EDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 125 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKNL 265
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA K L
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGL 71
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +2
Query: 107 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKN 262
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+++
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEH 72
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 122 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEK 259
V SK F V+ + + +V+FYAPWCG C AP+Y + A L K
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGK 483
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 80 LALGDEVPTEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 256
+AL + NV L +F + +T+ + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG 333
Query: 257 K 259
K
Sbjct: 334 K 334
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 265 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 420
P+ VD T L Y +R YPT + N P + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +1
Query: 256 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 423
E+ + +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 15 EKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 104 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 241
+E V +L+K F+ I + V+FYAPWC HC LAP + + A
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLA 132
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 325 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 417
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 131 KANFETVITTTE--YILVEFYAPWCGHCKSLAPEYAKAA 241
+A F +VI T+ ++++FYA WCG C+ + P++ K A
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA 56
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 113 NVLVLS-KANFETVITT--TEYILVEFYAPWCGHCKSLAPEYAKAATK 247
NV VL + F +T T+ ++ +F A WCG CKS+AP Y+ + K
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEK 55
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 280 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 432
K+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 113 NVLVLSKANFETVITT---TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 256
NV+V+ +F +V + ++++F A WCG CKS+AP + + K +
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD 59
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 280 KVDATQEQDLAESYGVRGYPTLKFFRNGSPID 375
KVD Q Q AES G+R PT F+ N + ID
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 34.7 bits (76), Expect = 0.082
Identities = 10/51 (19%), Positives = 29/51 (56%)
Frame = +2
Query: 110 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEKN 262
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+++
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRD 76
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 143 ETVITTTEYILVEFYAPWCGHCKSLAP 223
+ VI + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +1
Query: 268 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 447
+ +A V+ +E +LA+ GV+ + F G ++Y G + + + + PP
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTN 162
Query: 448 VTSAEQAKELIDANTVIVFGSF 513
+ + +Q L DA V G F
Sbjct: 163 IDNKKQRTLLEDAEGTKVVGYF 184
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 137 NFETVITTTEYIL--VEFYAPWCGHCKSLAPEYAKAATKLAEKNLLSN*RKLTQLKNRIS 310
+F+ +++++ +L V F+APW HC + + A + N + N + + ++ +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQKVVDRIDGANA 70
Query: 311 PRAT 322
P T
Sbjct: 71 PELT 74
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 32.3 bits (70), Expect = 0.43
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 140 FETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 241
F+ + E ++F A WCG C+ + P++ + A
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMA 37
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 319 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 432
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Frame = -3
Query: 546 GKFWLWLSSGPKRT----KYNNSIGIDK--FFS---LFSRGDLNSRGASLLLQPTDDVIS 394
GKF+L + P RT Y+N+IGI + +++ +FS+ L S G S+L DD+ S
Sbjct: 234 GKFYLRIVVNPNRTVAETDYDNNIGICEVDYYNPVVIFSKCRLVSTGQSILPVLPDDLSS 293
Query: 393 LTTT*IVDRTAIPEEFESRVSSYT 322
T + + + + ++SY+
Sbjct: 294 RTDSGVRQQETTRAIIKGDIASYS 317
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 176 VEFYAPWCGHCKSLAPEYAKAATKLAEK 259
V FYAPWCG + E+ AA+ L K
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLLYGK 484
>SB_54663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +3
Query: 441 C*GHLC*TG*RTYRCQYCYCIWFFSDQSSARAKTFLSTAQVVDDQVFAIVSDEKVIKELE 620
C H C RT Y FF+ +S+ +AK +V +F + S +
Sbjct: 12 CENHYCDHSKRTMEHSYTQSSCFFTPESAEKAKDMKDFGRVT--PIFGLTSSVFLSPPSS 69
Query: 621 AEDEDVVLFKNFEE-KRVKYEDEEITED 701
+E V FKN ++ R+ + EE ++
Sbjct: 70 SERSPVPNFKNLDDVPRLDLQTEESDQE 97
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 113 NVLVLSKANFETVITTTEYILVEFYA 190
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 325 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 417
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 600 KVIKELEAEDEDVVLFKNFEEKRVKYEDEE 689
+V KELEAE E L K EE+R++ E+EE
Sbjct: 1423 EVQKELEAEMEMERLQKENEEERLRKEEEE 1452
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 271 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 372
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +2
Query: 194 WCGHCKSLAPEYA--KAATKLAEK 259
WCG CK+L P++A K +L++K
Sbjct: 8 WCGACKALRPKFAESKEVAQLSKK 31
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 588 VSDEKVIKELEAEDEDVVLFKNFEEKRVKYEDEEITEDLLN 710
+SDE++ K + DE+ L K+ E+ +KY ++LLN
Sbjct: 437 LSDEEITKAILTIDEEEELSKDMVEQLLKYVPTAAEKNLLN 477
>SB_13530| Best HMM Match : RCSD (HMM E-Value=3.1)
Length = 215
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 231 PRQQQSWLRRISYQTSES*RNSRTGSRR 314
PR+++ +LRRIS TS+ + G RR
Sbjct: 71 PRKKKGFLRRISSMTSKGSKKEENGERR 98
>SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07)
Length = 272
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 355 RNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGSFRTRAQPE 534
R+ +P+ +G DDI + L + PP E A E+ A+ +V G E
Sbjct: 173 RDLTPLPGNGVPTLDDIPAVLIAEDRPPTYSEAVEEDALEMTAADVAVVHGGHTGETDTE 232
Query: 535 P 537
P
Sbjct: 233 P 233
>SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33)
Length = 567
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 575 LVINNLSS*KESFGSG*ALVRKEPNTITVLASISS 471
L NNL+S K+S S LV +EP TI+ L +I +
Sbjct: 304 LSANNLTSRKDSEDSADPLVLQEPPTISALPTIQN 338
>SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06)
Length = 257
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 164 EYILVEFYAPWCGHCKSLAPEYAKAAT 244
+YI+ +F CG CK+LAP ++ T
Sbjct: 123 KYIMKKFCQKECGLCKALAPPICQSTT 149
>SB_12095| Best HMM Match : Vicilin_N (HMM E-Value=0.083)
Length = 501
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 498 CIWFFSDQSSARAKTFLSTAQVVDDQVFAIVSDEKVIKELEAEDEDVVLFKNFEEKRVKY 677
C+ DQ + AQVV + + D + E + ++E+ + + F EK K
Sbjct: 178 CMIAHGDQCVVAHCVQCTIAQVVKRSIESAKKDASKVLERQRKEEEAQVLRRFREK--KE 235
Query: 678 EDEEITEDLLN 710
+ E + D LN
Sbjct: 236 DTETLVNDELN 246
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,044,695
Number of Sequences: 59808
Number of extensions: 415965
Number of successful extensions: 1328
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -