BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1185
(760 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M59303-1|AAA36499.1| 320|Homo sapiens protein Z protein. 31 4.5
M55671-1|AAA36501.1| 422|Homo sapiens protein Z protein. 31 4.5
M55670-1|AAA36500.1| 400|Homo sapiens protein Z protein. 31 4.5
BC074907-1|AAH74907.1| 400|Homo sapiens protein Z, vitamin K-de... 31 4.5
BC074906-1|AAH74906.1| 400|Homo sapiens protein Z, vitamin K-de... 31 4.5
AL137002-16|CAI41388.1| 400|Homo sapiens protein Z, vitamin K-d... 31 4.5
AL137002-15|CAI41389.1| 422|Homo sapiens protein Z, vitamin K-d... 31 4.5
AF440358-1|AAL27631.1| 400|Homo sapiens protein Z, vitamin K-de... 31 4.5
AB033749-2|BAA85764.1| 422|Homo sapiens protein Z spliced varia... 31 4.5
AB033749-1|BAA85763.1| 400|Homo sapiens protein Z protein. 31 4.5
>M59303-1|AAA36499.1| 320|Homo sapiens protein Z protein.
Length = 320
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 8 GSPCISQP--CLHNGSCQDSIWGYTCTC 33
>M55671-1|AAA36501.1| 422|Homo sapiens protein Z protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 110 GSPCISQP--CLHNGSCQDSIWGYTCTC 135
>M55670-1|AAA36500.1| 400|Homo sapiens protein Z protein.
Length = 400
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 88 GSPCISQP--CLHNGSCQDSIWGYTCTC 113
>BC074907-1|AAH74907.1| 400|Homo sapiens protein Z, vitamin
K-dependent plasma glycoprotein protein.
Length = 400
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 88 GSPCISQP--CLHNGSCQDSIWGYTCTC 113
>BC074906-1|AAH74906.1| 400|Homo sapiens protein Z, vitamin
K-dependent plasma glycoprotein protein.
Length = 400
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 88 GSPCISQP--CLHNGSCQDSIWGYTCTC 113
>AL137002-16|CAI41388.1| 400|Homo sapiens protein Z, vitamin
K-dependent plasma glycoprotein protein.
Length = 400
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 88 GSPCISQP--CLHNGSCQDSIWGYTCTC 113
>AL137002-15|CAI41389.1| 422|Homo sapiens protein Z, vitamin
K-dependent plasma glycoprotein protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 110 GSPCISQP--CLHNGSCQDSIWGYTCTC 135
>AF440358-1|AAL27631.1| 400|Homo sapiens protein Z, vitamin
K-dependent plasma glycoprotein protein.
Length = 400
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 88 GSPCISQP--CLHNGSCQDSIWGYTCTC 113
>AB033749-2|BAA85764.1| 422|Homo sapiens protein Z spliced variant
protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 110 GSPCISQP--CLHNGSCQDSIWGYTCTC 135
>AB033749-1|BAA85763.1| 400|Homo sapiens protein Z protein.
Length = 400
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 271 GGNCDHRPGDCCHSSSCRCNLWGSNCRC 354
G C +P C H+ SC+ ++WG C C
Sbjct: 88 GSPCISQP--CLHNGSCQDSIWGYTCTC 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,719,790
Number of Sequences: 237096
Number of extensions: 1907317
Number of successful extensions: 4891
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4886
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -