Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1184
         (396 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5ZVN4 Cluster: Glycosyltransferase; n=4; Legionella pn...    34   1.1  
UniRef50_Q8I551 Cluster: Putative uncharacterized protein; n=1; ...    34   1.1  
UniRef50_Q22P64 Cluster: Putative uncharacterized protein; n=1; ...    33   2.7  
UniRef50_Q8ILT3 Cluster: Putative uncharacterized protein; n=6; ...    31   6.1  
UniRef50_Q6G1J1 Cluster: Phosphatidate cytidylyltransferase; n=3...    31   8.1  
UniRef50_A3HX45 Cluster: Putative uncharacterized protein; n=1; ...    31   8.1  

>UniRef50_Q5ZVN4 Cluster: Glycosyltransferase; n=4; Legionella
           pneumophila|Rep: Glycosyltransferase - Legionella
           pneumophila subsp. pneumophila (strain Philadelphia 1
           /ATCC 33152 / DSM 7513)
          Length = 391

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -1

Query: 177 NLLQNTYFYALTIYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTI 10
           N L N Y Y L +Y+LLH     ++ F    I   +  S  P +++I  L+ ++T+
Sbjct: 186 NFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTL 241


>UniRef50_Q8I551 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1915

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 27/105 (25%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = -3

Query: 379 YFSHYLFHKLRHSFHIKNVILRNILYLLFINTII*ELSRHNI--FAILVLLALSSKDRDI 206
           +++ Y F+ ++++F +   + +NIL +LF N +   L+  N+    +  +LA +SK+R  
Sbjct: 687 FYNTYFFNLVKNNFFLYINVDKNILNVLFNNELQMFLNNKNLNYKNLYHMLAYNSKNRYN 746

Query: 205 KLNVLKT*NKFTSKHLFLCLNYLLPTAYGDN*IDQFSSRKYLNTT 71
           +LN+     K   K++   + Y+L   Y D+  ++  + K L  T
Sbjct: 747 QLNIRLLFYKVIFKNI---IKYILYIKYDDHKYEKNQNIKNLKET 788


>UniRef50_Q22P64 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 153

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +3

Query: 159 KCFEVNLFYVFKTFNLISRSFDDNANKTRIANILCRDNSYIIVLINRRYNI 311
           K  ++N+ Y+  +F +I+ + DD A KT +  +   DN Y+I L+ +R N+
Sbjct: 104 KLNQLNVMYLGSSFAIININNDD-AMKTYLLPLSKEDNKYLIQLLQQRKNL 153


>UniRef50_Q8ILT3 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 423

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 198 FNLISRSFDDNANKTRIANILCRDNSYIIVLIN-RRY 305
           F L+S +  D  +KT + NI+ RDNS +I  +N RRY
Sbjct: 203 FILLSNNRYDTMDKTTLKNIILRDNSIVIGGMNIRRY 239


>UniRef50_Q6G1J1 Cluster: Phosphatidate cytidylyltransferase; n=3;
           Bartonella|Rep: Phosphatidate cytidylyltransferase -
           Bartonella quintana (Rochalimaea quintana)
          Length = 271

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -3

Query: 349 RHSFHIKNVILRNILYLLFINTII*ELSRHNIFAILVLLA 230
           +  +H+   IL ++ YL+F + ++ ++S   IF IL+ LA
Sbjct: 49  KEKWHVSQKILASVFYLVFGSFLVSDVSASLIFCILIALA 88


>UniRef50_A3HX45 Cluster: Putative uncharacterized protein; n=1;
           Algoriphagus sp. PR1|Rep: Putative uncharacterized
           protein - Algoriphagus sp. PR1
          Length = 345

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 150 HKNKCFEVNLFYVFKTFNLISRSFDDNANKT 242
           + N  F +N+ YV+K  NLI   F DN+  T
Sbjct: 281 YNNDRFSINMNYVYKNSNLIKEEFFDNSINT 311


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,386,519
Number of Sequences: 1657284
Number of extensions: 5051973
Number of successful extensions: 11591
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11585
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)