BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1184
(396 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 26 0.44
AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor O... 25 1.0
AY363726-1|AAR14939.1| 331|Anopheles gambiae seven transmembran... 25 1.0
AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembran... 25 1.0
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 24 1.8
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 23 3.1
AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450 CY... 23 5.4
AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CY... 22 7.1
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 26.2 bits (55), Expect = 0.44
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 189 FKTFNLISRSFDDNANKTRIANILCRDNSYIIVLINRRY 305
F F ++SR DDNAN N C D+ L +R Y
Sbjct: 612 FDLFAMVSRFEDDNANVNYDENAGCDDSYAFCGLRDRVY 650
>AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor
Or83b protein.
Length = 478
Score = 25.0 bits (52), Expect = 1.0
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -1
Query: 180 INLLQNTYFYALTIYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTIILY 1
++ + +TY AL ++ L T+ L+++QA I + + L+ L L ++ ++
Sbjct: 344 VSAIGDTYGPALLLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 403
>AY363726-1|AAR14939.1| 331|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 331
Score = 25.0 bits (52), Expect = 1.0
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -1
Query: 180 INLLQNTYFYALTIYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTIILY 1
++ + +TY AL ++ L T+ L+++QA I + + L+ L L ++ ++
Sbjct: 197 VSAIGDTYGPALLLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 256
>AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 478
Score = 25.0 bits (52), Expect = 1.0
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -1
Query: 180 INLLQNTYFYALTIYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTIILY 1
++ + +TY AL ++ L T+ L+++QA I + + L+ L L ++ ++
Sbjct: 344 VSAIGDTYGPALLLHMLTSTIKLTLLAYQATKIDGVNVYGLTVIGYLCYALAQVFLFCIF 403
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 24.2 bits (50), Expect = 1.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 144 LRHKNKCFEVNLFYVFKTFNLISRSFDDNANKTRI 248
LRH N FE++L + + L R+FD+ + R+
Sbjct: 560 LRH-NSIFEIDLADMERLVLLEPRNFDEQTGRARV 593
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 23.4 bits (48), Expect = 3.1
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 189 FKTFNLISRSFDDNANKTRIANILCRDNSYIIVLINRRY 305
F F +IS DD N+ N+ C D+ L ++ Y
Sbjct: 600 FDLFAMISNYADDTVNQEFDENVNCNDSHSFCGLRDQLY 638
>AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450
CYP6P3 protein.
Length = 509
Score = 22.6 bits (46), Expect = 5.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 147 RHKNKCFEVNLFYVFKTF 200
++ NK FE+N + KTF
Sbjct: 208 KYGNKAFELNTMIMMKTF 225
>AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450
CYP9K1 protein.
Length = 531
Score = 22.2 bits (45), Expect = 7.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 369 IIYFTNYDTVSTL 331
+ +F YDTVSTL
Sbjct: 325 VFFFGGYDTVSTL 337
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,454
Number of Sequences: 2352
Number of extensions: 5743
Number of successful extensions: 54
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -