Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1184
(396 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074686-1|BAC11138.1| 143|Homo sapiens protein ( Homo sapiens ... 31 1.4
CR533511-1|CAG38542.1| 344|Homo sapiens ZDHHC4 protein. 29 5.6
BC001239-1|AAH01239.1| 344|Homo sapiens ZDHHC4 protein protein. 29 5.6
AY359090-1|AAQ89448.1| 344|Homo sapiens ZDHHC4 protein. 29 5.6
AK223532-1|BAD97252.1| 344|Homo sapiens zinc finger, DHHC domai... 29 5.6
AK001341-1|BAA91636.1| 344|Homo sapiens protein ( Homo sapiens ... 29 5.6
AF201931-1|AAF86867.1| 344|Homo sapiens DC1 protein. 29 5.6
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 28 9.7
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 28 9.7
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 28 9.7
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 28 9.7
>AK074686-1|BAC11138.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ90205 fis, clone MAMMA1001957, highly similar to
Minor histocompatibility antigen 13 isoform 4. ).
Length = 143
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 198 MF*KHRINLLQNTYFYALTIYYLLHTVITELISFQ 94
+F + INLL + YF+ L I L HT+ +E IS Q
Sbjct: 95 IFSQEYINLLLSMYFFVLGILALSHTIRSEGISLQ 129
>CR533511-1|CAG38542.1| 344|Homo sapiens ZDHHC4 protein.
Length = 344
Score = 29.1 bits (62), Expect = 5.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 370 HYLFHKLRHSFHIKNVILRNILY 302
HYLFH H+F + +++L+ ++Y
Sbjct: 58 HYLFHTRNHTFIVLHLVLQGMVY 80
>BC001239-1|AAH01239.1| 344|Homo sapiens ZDHHC4 protein protein.
Length = 344
Score = 29.1 bits (62), Expect = 5.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 370 HYLFHKLRHSFHIKNVILRNILY 302
HYLFH H+F + +++L+ ++Y
Sbjct: 58 HYLFHTRNHTFIVLHLVLQGMVY 80
>AY359090-1|AAQ89448.1| 344|Homo sapiens ZDHHC4 protein.
Length = 344
Score = 29.1 bits (62), Expect = 5.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 370 HYLFHKLRHSFHIKNVILRNILY 302
HYLFH H+F + +++L+ ++Y
Sbjct: 58 HYLFHTRNHTFIVLHLVLQGMVY 80
>AK223532-1|BAD97252.1| 344|Homo sapiens zinc finger, DHHC domain
containing 4 variant protein.
Length = 344
Score = 29.1 bits (62), Expect = 5.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 370 HYLFHKLRHSFHIKNVILRNILY 302
HYLFH H+F + +++L+ ++Y
Sbjct: 58 HYLFHTRNHTFIVLHLVLQGMVY 80
>AK001341-1|BAA91636.1| 344|Homo sapiens protein ( Homo sapiens
cDNA FLJ10479 fis, clone NT2RP2000120. ).
Length = 344
Score = 29.1 bits (62), Expect = 5.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 370 HYLFHKLRHSFHIKNVILRNILY 302
HYLFH H+F + +++L+ ++Y
Sbjct: 58 HYLFHTRNHTFIVLHLVLQGMVY 80
>AF201931-1|AAF86867.1| 344|Homo sapiens DC1 protein.
Length = 344
Score = 29.1 bits (62), Expect = 5.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 370 HYLFHKLRHSFHIKNVILRNILY 302
HYLFH H+F + +++L+ ++Y
Sbjct: 58 HYLFHTRNHTFIVLHLVLQGMVY 80
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 141 IYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTIIL 4
I+YL +T T+LI+ Q +++ +LSSL P L L+ + T+ L
Sbjct: 121 IFYLPNTTFTQLINLQNLDLSFNQLSSLHP--ELFYGLRKLQTLHL 164
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 141 IYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTIIL 4
I+YL +T T+LI+ Q +++ +LSSL P L L+ + T+ L
Sbjct: 121 IFYLPNTTFTQLINLQNLDLSFNQLSSLHP--ELFYGLRKLQTLHL 164
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 141 IYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTIIL 4
I+YL +T T+LI+ Q +++ +LSSL P L L+ + T+ L
Sbjct: 121 IFYLPNTTFTQLINLQNLDLSFNQLSSLHP--ELFYGLRKLQTLHL 164
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 141 IYYLLHTVITELISFQAVNI*TLRLSSLSPGSALILRLKNIYTIIL 4
I+YL +T T+LI+ Q +++ +LSSL P L L+ + T+ L
Sbjct: 134 IFYLPNTTFTQLINLQNLDLSFNQLSSLHP--ELFYGLRKLQTLHL 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,377,188
Number of Sequences: 237096
Number of extensions: 773949
Number of successful extensions: 779
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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