Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1183
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 9e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 9e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 187 9e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 187 9e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 9e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 9e-32
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 131 6e-31
SB_54| Best HMM Match : Actin (HMM E-Value=0) 109 2e-24
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 101 8e-22
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 7e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 9e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 1e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.098
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 32 0.39
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 32 0.52
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 32 0.52
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.52
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.69
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.69
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 2.1
SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 30 2.1
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.1
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.1
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 30 2.1
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 2.1
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 30 2.1
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.1
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.8
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.9
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 28 6.4
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 6.4
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 28 6.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 6.4
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 28 6.4
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 28 6.4
SB_23305| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 28 6.4
SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 28 6.4
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.4
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 28 8.5
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_12811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 187 bits (455), Expect = 9e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 134 bits (323), Expect = 9e-32
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 108 bits (259), Expect = 5e-24
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 187 bits (455), Expect = 9e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 134 bits (325), Expect = 5e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 137 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 196
Query: 688 GYSFT 702
GYSFT
Sbjct: 197 GYSFT 201
Score = 105 bits (252), Expect = 3e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 187 bits (455), Expect = 9e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 134 bits (325), Expect = 5e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 137 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 196
Query: 688 GYSFT 702
GYSFT
Sbjct: 197 GYSFT 201
Score = 106 bits (255), Expect = 2e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 187 bits (455), Expect = 9e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 134 bits (325), Expect = 5e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 187 bits (455), Expect = 9e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFN+PAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 108 bits (259), Expect = 5e-24
Identities = 47/52 (90%), Positives = 51/52 (98%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/36 (88%), Positives = 34/36 (94%), Gaps = 2/36 (5%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 609
QAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 138 QAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 134 bits (323), Expect = 9e-32
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTER
Sbjct: 100 QAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTER 159
Query: 688 GYSFT 702
GYSFT
Sbjct: 160 GYSFT 164
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 443 NREKMTQIMFETFNTPAMYVAIK 511
N + M +IMFETFN+PAMYVAI+
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQ 100
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 131 bits (316), Expect = 6e-31
Identities = 60/65 (92%), Positives = 63/65 (96%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TER
Sbjct: 16 QAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTER 75
Query: 688 GYSFT 702
GYSFT
Sbjct: 76 GYSFT 80
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 464 IMFETFNTPAMYVAIK 511
IMFE FN+PA+YVAI+
Sbjct: 1 IMFEAFNSPAVYVAIQ 16
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 109 bits (262), Expect = 2e-24
Identities = 48/64 (75%), Positives = 56/64 (87%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TER
Sbjct: 2182 QAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTER 2241
Query: 688 GYSF 699
GYSF
Sbjct: 2242 GYSF 2245
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = +2
Query: 350 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 224
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 101 bits (241), Expect = 8e-22
Identities = 43/64 (67%), Positives = 57/64 (89%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L +
Sbjct: 163 QAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKE 222
Query: 688 GYSF 699
G+ F
Sbjct: 223 GHCF 226
Score = 61.7 bits (143), Expect = 6e-10
Identities = 23/38 (60%), Positives = 33/38 (86%)
Frame = +2
Query: 398 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511
+HPVLLTEAPLNP+ NREK ++ FETFN PA++++++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQ 163
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ R
Sbjct: 141 QAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLR 200
Query: 688 GYSF 699
GY+F
Sbjct: 201 GYAF 204
Score = 95.1 bits (226), Expect = 5e-20
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 436
VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP
Sbjct: 57 VGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNP 116
Query: 437 KANREKMTQIMFETFNTPAMYVAIK 511
NREKM ++MFE + +Y+AI+
Sbjct: 117 MKNREKMIEVMFENYQFEGVYIAIQ 141
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +3
Query: 117 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDLM 260
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KDLM
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLM 56
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +2
Query: 308 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 487
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 488 PAMYV 502
PA ++
Sbjct: 63 PAFFL 67
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +1
Query: 511 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 684
+VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 224
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +1
Query: 544 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 505 HQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-T 681
+Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L
Sbjct: 766 NQLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRD 825
Query: 682 ERGYSFT 702
+RG++FT
Sbjct: 826 QRGHNFT 832
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 93 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 239
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 415
++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 285 FIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 544 TGIVLDSGDGVSHTVPI 594
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 221 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 105
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 224 GRDGRYGTEGPYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 394
GR G + G VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 395 EEHPVLLTEAPLNPKANRE 451
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.098
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 379
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 111 EVAALVVDNGSGMCKAGFAGDDAPRAV 191
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -2
Query: 313 DGVFEGQDTSFALCLISYIRSFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPL 134
DG F+L L + IR + + W GNT R PAKPAL++P P
Sbjct: 41 DGEMRAILNDFSLPLDAKIRHYNRVSNQYLKWLQQLKDGGNTNRRTRIPAKPALNLPSPP 100
Query: 133 STT 125
S T
Sbjct: 101 SKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -2
Query: 280 ALCLISYIRSFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTT 125
+L L + IR + + P W GNT R PAKP+L++P P S T
Sbjct: 512 SLPLDAKIRHYNRLSNQYPKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTR 601
A P A + + +NTP ++ P P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQ--APPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 602 DTHSP 616
P
Sbjct: 946 QPQPP 950
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +2
Query: 524 CTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 616
CT+ +P +TP T TPC PST +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Frame = +2
Query: 404 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVV---PPVSCWTPATV 574
P L+T PL +T NTP + P T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 575 SPTP--CPSTRDTHSPTPSCVWT*P 643
+ TP +T + TP V T P
Sbjct: 94 TTTPLLVTTTPFLVTTTPPLVTTTP 118
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +2
Query: 449 EKMTQIMFETFNTPAMYVAIKPCSR----CTRPVVPP-VSCWTPATVSPTPC 589
+K T + F TP++ P S T P VPP V+ P T +P PC
Sbjct: 188 DKQTDVCHLIFPTPSLGTQAPPPSTGGVTLTTPTVPPRVASTEPTTFTPKPC 239
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 534 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHE 671
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/74 (27%), Positives = 26/74 (35%)
Frame = +2
Query: 404 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPT 583
P T P P T +T TP P P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 584 PCPSTRDTHSPTPS 625
T+ T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 476 TFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPT 583
T TP + KP + P P + TP T +PT
Sbjct: 113 TTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +2
Query: 362 HTFYNELRVAP--EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRP 535
HT N AP HP L P+A +T M + P S T P
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQA--APVTPPMGAQLPETEQPQMVAPSSTVTPP 333
Query: 536 VV---PPVSCWTPATVSPTPCPSTRDTHSPTPS 625
V PP S P PTP + +P PS
Sbjct: 334 VTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 512 PCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 625
P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 325 PTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 269 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153
H++ K ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 524 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Frame = +2
Query: 416 TEAPLNPKANR---EKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATV---- 574
TEA +PKAN+ +K + + + A PC+ P PPV PA +
Sbjct: 1336 TEAGKHPKANKVGKDKHNKGTKKCYGACAPPPMADPCATMAAPCAPPVMMAAPAPMLAPM 1395
Query: 575 ---SPTPC-PSTRDTHS 613
P PC P THS
Sbjct: 1396 LAPMPAPCAPPECHTHS 1412
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 512 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
P + TRP VP +T PTP P T P P+
Sbjct: 927 PPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 476 TFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 628
T NT + A C R T VPPVS +P PC P +C
Sbjct: 629 TDNTRTRFKAFGECGRTT---VPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 117
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 116 NFFVAHLE 93
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 117
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 116 NFFVAHLE 93
V L+
Sbjct: 152 QVDVLLLD 159
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 395 EEHPVLLTEAPLNPKANREKMTQIMF-ETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPAT 571
EEH ++ T N ++ + MF E +TP + S + P P+S TP+
Sbjct: 2034 EEHVMMETTLHHNNQSMCVPVESGMFREKHHTPPSAHSYGTSSYDSSPQKLPISYLTPSP 2093
Query: 572 VSPTPCPSTRDTHSPTPSC 628
SP S+ +HS +C
Sbjct: 2094 ESPKDWSSSPSSHSDWSNC 2112
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 117
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 116 NFFVAHLE 93
V L+
Sbjct: 185 QVDVLLLD 192
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 579 PHRAHLRGIRTPPR-HPASGLSRSRPHRLPHEDPH 680
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 527 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 631
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 117
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 116 NFFVAHLE 93
V L+
Sbjct: 102 QVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 117
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 116 NFFVAHLE 93
V L+
Sbjct: 774 QVDVLLLD 781
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +2
Query: 476 TFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
T T A P + T P P + TP T + TP +P P+
Sbjct: 123 TAPTTAATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_23305| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
Length = 808
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 540 TTGRVQREHGLMATYMAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATR 382
T G VQR GL+ + + N S +F L+ G R S S G S AT+
Sbjct: 275 TVGEVQRLLGLLGYHRQYIANFSKTAKCLFQLIQ-GPRDKSSSSKGGPSSATK 326
>SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
Length = 994
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 540 TTGRVQREHGLMATYMAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATR 382
T G VQR GL+ + + N S +F L+ G R S S G S AT+
Sbjct: 832 TVGEVQRLLGLLGYHRQYIANFSKTAKCLFQLIQ-GPRDKSSSSKGGPSSATK 883
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -1
Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 117
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 116 NFFVAHLE 93
V L+
Sbjct: 858 QVDVLLLD 865
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/73 (28%), Positives = 27/73 (36%)
Frame = +2
Query: 404 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPT 583
PVL A P A + TQ + P ++ + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 584 PCPSTRDTHSPTP 622
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +2
Query: 464 IMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 634
+ F P V KP + T P P T TV PT PS D T C W
Sbjct: 1685 VEFVVGTCPITPVNAKPTNPWTTPAPSP----TATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_12811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1254
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 491 AMYVAIKPCSRC--TRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 619
A Y I +RC TRP P S P ++ +TR +H PT
Sbjct: 14 AYYQTISQSNRCVTTRPSHTPTSALLPDHLTRQQVRTTRPSHMPT 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,871,332
Number of Sequences: 59808
Number of extensions: 622342
Number of successful extensions: 2394
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2366
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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