Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1183
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 188 3e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 188 3e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 188 3e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 188 3e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 188 3e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 188 3e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 188 3e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 188 3e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 184 4e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 121 6e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 113 9e-26
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 113 9e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 112 2e-25
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 112 2e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 1e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.009
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.009
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.009
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 37 0.012
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 37 0.012
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 29 4.3
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 4.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 28 5.7
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 28 5.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 5.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 5.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 5.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 5.7
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 5.7
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 7.5
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 28 7.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 7.5
Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 27 9.9
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 27 9.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (327), Expect = 3e-32
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (327), Expect = 3e-32
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 111 bits (266), Expect = 6e-25
Identities = 48/52 (92%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQ 94
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 94 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 153
Query: 688 GYSFT 702
GYSFT
Sbjct: 154 GYSFT 158
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 124 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 183
Query: 688 GYSFT 702
GYSFT
Sbjct: 184 GYSFT 188
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3
Query: 153 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 38
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 135 bits (326), Expect = 3e-32
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER
Sbjct: 138 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
Query: 688 GYSFT 702
GYSFT
Sbjct: 198 GYSFT 202
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 82/90 (91%), Positives = 86/90 (95%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPK+NREKMTQIMFETFNTPAMYV I+
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQ 137
Score = 130 bits (313), Expect = 1e-30
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTER
Sbjct: 137 QAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTER 196
Query: 688 GYSFT 702
GY+FT
Sbjct: 197 GYTFT 201
Score = 107 bits (257), Expect = 8e-24
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 121 bits (291), Expect = 6e-28
Identities = 50/92 (54%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +2
Query: 242 GTEGP-YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 415
G +G ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 416 TEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511
T+APLNP NRE+ +I FETFN PA+Y+ ++
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQ 141
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L
Sbjct: 141 QAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRRE 200
Query: 688 GYSF 699
GY F
Sbjct: 201 GYEF 204
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 239
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 113 bits (273), Expect = 9e-26
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 112 bits (270), Expect = 2e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 346
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 433
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 434 PKANREKMTQIMFETFNTPAMYVAIK 511
NRE +IMFE+FN P +Y+A++
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQ 151
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
Frame = +1
Query: 508 QAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 663
QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T +
Sbjct: 151 QAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYF 210
Query: 664 LMKILTERGYS 696
+ +L +R ++
Sbjct: 211 IQSLLRDREHT 221
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 206
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNP 436
VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP
Sbjct: 57 VGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNP 116
Query: 437 KANREKMTQIMFETFNTPAMYVAIK 511
+NREKM Q+MFE + ++YVA++
Sbjct: 117 NSNREKMFQVMFEQYGFNSIYVAVQ 141
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +R
Sbjct: 141 QAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQR 200
Query: 688 GYSF 699
GY+F
Sbjct: 201 GYNF 204
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 215
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +2
Query: 311 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 490
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 491 AMYVA 505
A Y++
Sbjct: 154 AYYLS 158
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = +1
Query: 514 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 687
VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 162 VLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 206
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 445
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 446 REKMTQIMFETF 481
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 681
Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLS 366
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 445
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 446 REKMTQIMFETF 481
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +2
Query: 392 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPAT 571
P P + +P P T + T +T A + P S T P VPPV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 572 VSPTPCPSTRDT 607
+ T +T T
Sbjct: 689 TTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +2
Query: 392 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPAT 571
P P + +P P T + T +T A + P S T P VPPV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 572 VSPTPCPSTRDT 607
+ T +T T
Sbjct: 745 TTSTTTTTTTTT 756
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 476 TFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT 607
T +T A + P S T P VPPV+ TP T + T +T T
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 476 TFNTPAMYVAIKPCSRCTRPVVPPVSCWT--PATVSPTPCPSTRDTHSPTPSC 628
T +P+ V P P VPP T P TVS P PS PT SC
Sbjct: 351 TIPSPSKVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 488 PAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 628
P A PC+ C +P P +C T V TP P T T P+C
Sbjct: 182 PCPQQAACPCTTCNQPPPPCNTCNTQPVVIVTPAPCT--TCYQPPAC 226
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Frame = +2
Query: 398 EHPVLL--TEAPLNPKANREKMTQIMFE-TFNTPAMY-------VAIKPCSRCTRPVVPP 547
+HP+LL T+ P+ N + + F+ T+++ M V I C + +RP +
Sbjct: 724 QHPMLLFSTQQPMTCTPNSQNSCPLGFQCTYSSIRMLYFCCRDIVRIDKCLQGSRPEIWQ 783
Query: 548 VSCWTPATVSPTPCPSTRDTHSPTP 622
+ A CPST ++PTP
Sbjct: 784 STAEPRACSRDAQCPSTTSCYAPTP 808
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 533 PVVPPVSCWTPATVSPTPCPSTRDTHSPTP 622
P++PP PA V T P+TR+T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = +2
Query: 416 TEAPLNPKANREKMTQIMFETFNTPAMYV----AIKPCSRCTRPVVPPVSCWTPATVSPT 583
T P E T ET TP P + T P + T T +PT
Sbjct: 96 TTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPT 155
Query: 584 PCPSTRDTHSPTPSCVWT*P 643
+T T + TP+ T P
Sbjct: 156 TTTTTPTTTTTTPTTTTTTP 175
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 512 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 637
P + T P + TP T + TP +T T +PT T
Sbjct: 78 PTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/74 (25%), Positives = 26/74 (35%)
Frame = +2
Query: 404 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPT 583
P T AP T T P P + T P + TP T + T
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTT-TTTTPTTTTTTTTTPTTTTTTPTTTT-T 246
Query: 584 PCPSTRDTHSPTPS 625
P +T +T + TP+
Sbjct: 247 PATTTSETTTTTPT 260
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +2
Query: 416 TEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPS 595
T P T ET TP + T P + TP T + TP +
Sbjct: 119 TPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTT 178
Query: 596 TR--DTHSPTPSCVWT*P 643
T T + TP+ T P
Sbjct: 179 TTTPTTTTTTPTTTTTAP 196
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 203 RGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -3
Query: 360 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPT*GPSVPYRPSRPDG 217
CQ+FS QLVT+ SMG +++++ L L AS + P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +2
Query: 494 MYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
M+ + P R P TP+ +P+P T +PTP+
Sbjct: 291 MFRNLNPFDRTPTPTTKKTQSVTPSNSTPSPAKPATPTKTPTPT 334
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/67 (32%), Positives = 27/67 (40%)
Frame = +2
Query: 437 KANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 616
K+ +E T I F T P S T +VP S T T + TP P T T P
Sbjct: 428 KSTKEPKTTI-FTTTPVPCPTTTSTTTSATT--LVPTTSSSTTTTTTTTPVPVTSTTTEP 484
Query: 617 TPSCVWT 637
T + T
Sbjct: 485 TTTTYTT 491
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 485 TPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 637
TP++ V + P S P P S PAT P + R T PTP WT
Sbjct: 206 TPSI-VTVTPPSPSVTPGGRPGST-PPATFPPGSVSTVRYTPGPTPPAPWT 254
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +2
Query: 392 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIKPCSRCTRPVVPPVSCWTPAT 571
P E P ++ P +P + + Q+ T P A S T P+ P + P T
Sbjct: 1499 PAEIPRVVV--PQSPGTPQPVVPQVSIVTPQAPQPTAAATSAS--TGPIAPEPTTAAPTT 1554
Query: 572 VSPTPCPSTRDTHSP 616
TP P + H P
Sbjct: 1555 TETTPLPPSLAPHPP 1569
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 446 REKMTQIMFETFN------TPAMYVAIKPCSRCTRPVVPPVSCWTPATVS 577
R++ Q+ F+T + TP + VA+ C + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 395 EEHPVLLTEAPLNPKANREK-MTQIMFETF--NTPAMYVAIKPCSRCTRPVVPPVSCWTP 565
++ P T+AP + R T I F TPA + + P TR + P T
Sbjct: 104 KKEPKKTTQAPTTIRTTRPPPATTIRTIPFVQTTPATFATLPPAPAVTRAPIQPFVPQTV 163
Query: 566 ATVSPT 583
AT++P+
Sbjct: 164 ATIAPS 169
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 446 REKMTQIMFETFN------TPAMYVAIKPCSRCTRPVVPPVSCWTPATVS 577
R++ Q+ F+T + TP + VA+ C + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 178 ASSPAKPALHIPEPLSTTNAATSS 107
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 527 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
T PP S TP + T P T T SP+ S
Sbjct: 221 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 527 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
T PP S TP + T P T T SP+ S
Sbjct: 497 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 476 TFNTPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTR--DTHSPTPSCVWT*P 643
TFN KP + T P + TP T + TP +T T + TP+ T P
Sbjct: 73 TFNAVCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 130
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 194 PLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
P RG P GRDGR +GP G +Q RG
Sbjct: 472 PGRRGSGGPEGRDGR--GQGPDFGPGSQGGRG 501
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 194 PLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
P RG P GRDGR +GP G +Q RG
Sbjct: 537 PGRRGSGGPEGRDGR--GQGPDFGPGSQGGRG 566
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 153 KAGFAGDDAPRAVFPSIVGRPRHQG 227
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 512 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 616
P + P +PP + T T + PCP T++P
Sbjct: 127 PVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical
protein T18D3.9 protein.
Length = 181
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 332 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511
+WD +++ W + + L+V P V L PLN R + Q++ +N Y+ K
Sbjct: 116 SWDLLKEDWFNIYATSLKVWPFVQVVNLCFVPLN---YRVILNQVVAFFWNCYLSYITQK 172
Query: 512 P 514
P
Sbjct: 173 P 173
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 206 GKAPPSGRDGRYGTEGPYVGDEAQS 280
G+A P+GRDG G +GP +G + S
Sbjct: 206 GEAGPNGRDGTRGQKGP-IGPKGDS 229
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 485 TPAMYVAIKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 637
TP++ V + P S P P S PAT P + R T PTP WT
Sbjct: 129 TPSI-VTVTPPSPSVTPGGRPGST-PPATFPPGSISTVRYTPGPTPPGPWT 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,534,574
Number of Sequences: 27780
Number of extensions: 421110
Number of successful extensions: 2164
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2141
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -