Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1182X
(333 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD... 35 0.41
UniRef50_Q23F40 Cluster: Zinc finger domain, LSD1 subclass famil... 33 1.7
UniRef50_Q98RM4 Cluster: Putative uncharacterized protein orf365... 32 2.2
UniRef50_Q5CSS5 Cluster: Extracellular membrane associated prote... 32 2.2
UniRef50_Q23Q81 Cluster: Putative uncharacterized protein; n=1; ... 32 2.2
UniRef50_A0CRW9 Cluster: Chromosome undetermined scaffold_250, w... 32 2.2
UniRef50_Q8IDJ5 Cluster: Putative uncharacterized protein PF13_0... 32 2.9
UniRef50_Q7RDR7 Cluster: Putative uncharacterized protein PY0535... 31 3.9
UniRef50_O43989 Cluster: Homeobox-containing protein; n=3; Dicty... 31 3.9
UniRef50_Q7RK19 Cluster: Putative uncharacterized protein PY0308... 31 5.1
UniRef50_Q4YNK0 Cluster: Putative uncharacterized protein; n=4; ... 31 5.1
UniRef50_A7AS40 Cluster: Amine oxidase, putative; n=1; Babesia b... 31 5.1
UniRef50_O97236 Cluster: Putative uncharacterized protein MAL3P2... 25 6.5
UniRef50_Q112X2 Cluster: Leucine-rich repeat, typical subtype; n... 31 6.7
UniRef50_Q8IJR5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE032... 31 6.7
UniRef50_Q7RRN5 Cluster: Bromodomain, putative; n=13; Aconoidasi... 31 6.7
UniRef50_Q7RQ36 Cluster: Putative uncharacterized protein PY0126... 31 6.7
UniRef50_Q7RHV0 Cluster: Putative uncharacterized protein PY0388... 31 6.7
UniRef50_Q6LFA6 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q54X79 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q95Z20 Cluster: Asparagine-rich protein; n=2; Plasmodiu... 30 8.9
UniRef50_Q8IDN9 Cluster: Putative uncharacterized protein PF13_0... 30 8.9
UniRef50_Q8IDA8 Cluster: MAL13P1.296 protein; n=1; Plasmodium fa... 30 8.9
UniRef50_Q6LFP0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_Q4N0J9 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
protein - Plasmodium falciparum
Length = 960
Score = 34.7 bits (76), Expect = 0.41
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 135 NNVSSFT*IYKMSNHFN---NYLYNDQTDNTSYLNLNFSYLHSVTRFICNHIGEFIICN* 305
NN + + IY + N+FN NY Y +N +++N N Y FI + I N
Sbjct: 484 NNNNKYNVIYFLINYFNLFSNYYYKIYNNNYNFINSN--YYFKKMNFILKNFNNIQILNK 541
Query: 306 LFY 314
LFY
Sbjct: 542 LFY 544
>UniRef50_Q23F40 Cluster: Zinc finger domain, LSD1 subclass family
protein; n=4; Tetrahymena thermophila SB210|Rep: Zinc
finger domain, LSD1 subclass family protein - Tetrahymena
thermophila SB210
Length = 2510
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 111 YFYKYIN*NNVSSFT*IYKMSNHFNNYL--YNDQTDNTSYLN 230
Y +KYIN NN+ S K+ +NN++ YN Q +N++ LN
Sbjct: 2402 YKWKYINQNNIGSKK-FLKLKQIYNNHVNAYNTQNNNSAILN 2442
>UniRef50_Q98RM4 Cluster: Putative uncharacterized protein orf365;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf365 - Guillardia theta (Cryptomonas phi)
Length = 365
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 105 QFYFYKYIN*NNVSS-FT*IYKMSNHFNNYLYNDQTDNTSYLNLNFSYLH-SVTRFICNH 278
+ YF+KY N NN + + + M ++ NY +NT N+ F Y+ + FICN+
Sbjct: 52 KIYFFKYFNSNNKRNLYKNSFIMKHNIINYRVKVNINNTK-KNIYFDYVFINKNCFICNY 110
Query: 279 IGEF 290
F
Sbjct: 111 SSNF 114
>UniRef50_Q5CSS5 Cluster: Extracellular membrane associated protein
with a signal peptide, EGF domain, 9x transmembrane
domains and a pentraxin domain; n=4; Eukaryota|Rep:
Extracellular membrane associated protein with a signal
peptide, EGF domain, 9x transmembrane domains and a
pentraxin domain - Cryptosporidium parvum Iowa II
Length = 3008
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 129 N*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLNFS 242
N NN +++ Y +N++NNY N +N +Y+N N S
Sbjct: 2379 NNNNYNNYNNNYYNNNYYNNYNNNININNNNYINNNTS 2416
>UniRef50_Q23Q81 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 499
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 120 KYIN*NNVSSFT*IYKMSN--HFNNYLYNDQTDNTSYLNLNFSYLHSV-TRFI 269
KYI N+V + T + K SN H N + N TSYL+ NF + V TRF+
Sbjct: 212 KYIE-NSVLTLTTVLKFSNKFHHENCVENISQVATSYLSTNFDVVQDVNTRFL 263
>UniRef50_A0CRW9 Cluster: Chromosome undetermined scaffold_250,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_250,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 163
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 165 KMSNHFNNYLYNDQTDNTSYLNLNFSYLHSVTRF 266
K+ + F N++ D ++LNLNF LH V F
Sbjct: 29 KLGSLFYQMAINNENDEQNFLNLNFQLLHKVQEF 62
>UniRef50_Q8IDJ5 Cluster: Putative uncharacterized protein
PF13_0264; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0264 - Plasmodium
falciparum (isolate 3D7)
Length = 709
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 186 NYLYNDQTDNTSYLNLNFSYLHSVTRFICNHIGEFI 293
N + N+ +N SY N+ +SY+ S CNHI FI
Sbjct: 258 NKINNNNNNNKSYSNICYSYVDSHEIINCNHILLFI 293
>UniRef50_Q7RDR7 Cluster: Putative uncharacterized protein PY05354;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05354 - Plasmodium yoelii yoelii
Length = 1317
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 159 IYKMSNHFNNYLYNDQTDNTSY-LNLNFSYLHSVTRFICNHIGEFI 293
I + +N+ + +N++ + TS N+N Y + FICN + EFI
Sbjct: 830 ICQETNNIKDDAHNNKKEETSNEYNINKLYFNKTIDFICNELNEFI 875
>UniRef50_O43989 Cluster: Homeobox-containing protein; n=3;
Dictyostelium discoideum|Rep: Homeobox-containing
protein - Dictyostelium discoideum (Slime mold)
Length = 534
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 123 YIN*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLN 236
Y N NN ++F Y M+N+ NNY N+ +N SY N N
Sbjct: 385 YNNNNNNNNFNNNY-MNNYNNNYNNNNYNNNNSYNNSN 421
>UniRef50_Q7RK19 Cluster: Putative uncharacterized protein PY03086;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY03086 - Plasmodium yoelii
yoelii
Length = 1321
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 129 N*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYL---NLNFSYLHSVTRFICN 275
N NN +S+ +N +NN YN+ ++N SY+ N N S+ + T I N
Sbjct: 95 NSNNNNSYNNNSYNNNSYNNNSYNNNSNNNSYIDQRNNNLSFKKNTTHSINN 146
>UniRef50_Q4YNK0 Cluster: Putative uncharacterized protein; n=4;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 654
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 99 LLQFYFYKYIN*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLNFSYLHSVTRFIC 272
L + Y + +NV F + NH N Y ++ +N LN+ +HS+ + C
Sbjct: 412 LKDYKLYLFFKLDNVLDFVLFTDIINHINFYYISNNNNNDKILNVYRCLVHSLVKCEC 469
>UniRef50_A7AS40 Cluster: Amine oxidase, putative; n=1; Babesia
bovis|Rep: Amine oxidase, putative - Babesia bovis
Length = 1275
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 162 YKMSNHFNNYLYNDQTDNTSYLNLNFSYLHSVTRFICN 275
Y + N L+N DN ++ N ++SY H++ R I N
Sbjct: 448 YVSEGLYRNVLHNSSADNGNWHNESYSYSHNIPRDINN 485
>UniRef50_O97236 Cluster: Putative uncharacterized protein
MAL3P2.15; n=3; Plasmodium|Rep: Putative uncharacterized
protein MAL3P2.15 - Plasmodium falciparum (isolate 3D7)
Length = 3978
Score = 25.4 bits (53), Expect(2) = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 123 YIN*NNVSSFT*--IYKMSNHFNNYLYNDQTDNTS 221
YIN NN+++ I FNNYLY++ +N S
Sbjct: 261 YINSNNINNNNNNNINICGQPFNNYLYSNLNNNVS 295
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 225 LNLNFSYLHSVTRFICNH 278
LN+ + Y+H+ +++ NH
Sbjct: 334 LNIPYPYIHNTNKYVDNH 351
>UniRef50_Q112X2 Cluster: Leucine-rich repeat, typical subtype; n=1;
Trichodesmium erythraeum IMS101|Rep: Leucine-rich
repeat, typical subtype - Trichodesmium erythraeum
(strain IMS101)
Length = 347
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 123 YIN*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYL-NL-NFSYLHSVTRFI 269
Y+N NN+ + + ++N N YLY +Q + S L NL N +YL +I
Sbjct: 216 YLNDNNIKELSPLSSLTNLTNLYLYRNQISHISSLSNLTNLTYLSLSDNYI 266
>UniRef50_Q8IJR5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 499
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 159 IYKMSNHFNNYLYNDQTDNTSYLN-LNFSY 245
IY+ ++H NNY ND DN + N LN SY
Sbjct: 280 IYEHNHHHNNYNNNDDDDNDNNSNRLNSSY 309
>UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE0325w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0325w - Plasmodium falciparum
(isolate 3D7)
Length = 3008
Score = 30.7 bits (66), Expect = 6.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 168 MSNHFNNYLYNDQTDNTS 221
+SNH NNY+YN+ +N S
Sbjct: 744 LSNHMNNYIYNNNNNNNS 761
>UniRef50_Q7RRN5 Cluster: Bromodomain, putative; n=13;
Aconoidasida|Rep: Bromodomain, putative - Plasmodium
yoelii yoelii
Length = 4805
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 126 IN*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLNFSYLHSVTRFICNHI 281
IN N++ + I ++ N YND + + +YLN NF+ +H + I N +
Sbjct: 3256 INQNHIVNMNKINNVNEIKNLNKYNDMSTHANYLN-NFNNVHMLNNMITNKV 3306
>UniRef50_Q7RQ36 Cluster: Putative uncharacterized protein PY01267;
n=11; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01267 - Plasmodium yoelii yoelii
Length = 2156
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 135 NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLNFSY 245
NN S IYK+ + NY+ N+ TD ++Y+N N+SY
Sbjct: 1297 NNYSINNSIYKLGS---NYMNNEDTDASNYIN-NYSY 1329
>UniRef50_Q7RHV0 Cluster: Putative uncharacterized protein PY03883;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03883 - Plasmodium yoelii yoelii
Length = 1127
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 120 KYIN*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLNFSYLHSV-TRFICNHIGEFII 296
K I+ N+ S F I+ M+N NN YN + S N + L+ +CN + I
Sbjct: 269 KLISQNDYSDFKIIFNMTNRSNNNKYNGNKNMFSENRTNINRLNFFDITILCNTYSKINI 328
Query: 297 CN*LFY 314
N L Y
Sbjct: 329 VNKLEY 334
>UniRef50_Q6LFA6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1680
Score = 30.7 bits (66), Expect = 6.7
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 48 Y*VY*QP*PCCQFKNL*LLQFYFYKY--IN*NNVSSFT*IYKMSNHFNNYLYND-QTDNT 218
Y +Y P F + F+F Y ++ NN+++ I ++N+ NN +N T
Sbjct: 458 YKLYHVPINTSNFIEYYMKNFFFPSYSPMHMNNMNNMNNINNINNNNNNIYHNTLDTKFL 517
Query: 219 SYLNLNFSYLHSVTRFICN 275
YLN+ S+LH + N
Sbjct: 518 LYLNMLHSFLHMKNYYFIN 536
>UniRef50_Q54X79 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 503
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 174 NHFNNYLYNDQTDNTSYLNLNFSYLHSVTRFICNHIGEFIICN 302
N+FNN YN+ N + LNLN S LHS + N GE N
Sbjct: 414 NNFNNEHYNNTNFNATSLNLN-SQLHS--NLLANTNGELFYDN 453
>UniRef50_Q95Z20 Cluster: Asparagine-rich protein; n=2; Plasmodium
falciparum|Rep: Asparagine-rich protein - Plasmodium
falciparum
Length = 541
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 129 N*NNVSSFT*IYKMSN--HFNNYLYNDQTDNTSYLNLNFSYLHSVTRFICNHIGEFIICN 302
N +N+++ I M+N H NN Y ++ +N SYLN N L+ + F NHI + + N
Sbjct: 243 NVDNINNVDNINNMNNMYHMNNINYMNRINNMSYLN-NTIPLNCINVF--NHINDNLRNN 299
Query: 303 *LFY 314
+ Y
Sbjct: 300 LISY 303
>UniRef50_Q8IDN9 Cluster: Putative uncharacterized protein
PF13_0243; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0243 - Plasmodium
falciparum (isolate 3D7)
Length = 994
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 177 HFNNYLYNDQTDNTSYLNLNFSYLH 251
HFN+Y YN+ +NTS +N S H
Sbjct: 122 HFNDYNYNNNKNNTSKINKKSSKYH 146
>UniRef50_Q8IDA8 Cluster: MAL13P1.296 protein; n=1; Plasmodium
falciparum 3D7|Rep: MAL13P1.296 protein - Plasmodium
falciparum (isolate 3D7)
Length = 3574
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 177 HFNNYLYNDQTDNTSYLNLNFSYLHSVTRFICNHIGEFIICN 302
+FNNY+Y D N SY N +Y + + N F+I N
Sbjct: 873 NFNNYMYEDSEYNCSY---NNNYSEKICTDVYNSTPNFLITN 911
>UniRef50_Q6LFP0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1297
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 138 NVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLNFSYLH 251
NV S IY+ N NNYLYN+ + + N N YL+
Sbjct: 24 NVKSGNSIYQNKNDMNNYLYNNNINISG--NTNSGYLN 59
>UniRef50_Q4N0J9 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 595
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 159 IYKMSNHFNNYLYNDQTDNTS-YLNLNF-SYLHSVTRFICNHIGEFII 296
+ ++ NH+ NY+Y +NT+ + LN+ Y+ + + IC++ E ++
Sbjct: 403 VLRLFNHYLNYIYKVMYNNTNKQMTLNYDKYIKFLYKLICSNDNETLM 450
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,373,240
Number of Sequences: 1657284
Number of extensions: 3873872
Number of successful extensions: 12373
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12328
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -