Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1182X
         (333 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1778|AAM71009.1|  975|Drosophila melanogaster CG30485-P...    29   1.1  
AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-P...    29   1.5  

>AE013599-1778|AAM71009.1|  975|Drosophila melanogaster CG30485-PA
           protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -1

Query: 255 RNGDRRSLSSSKKYCLFDHCR 193
           RNG ++ ++SS+K C  DHC+
Sbjct: 348 RNGKKKRVTSSEKKCYDDHCK 368


>AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-PB
            protein.
          Length = 1103

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 99   LLQFYFYKYIN*NNVSSFT*IYKMSNHFNNYLYNDQTDNTSYLNLNFSY 245
            LL +Y+Y Y   NN ++       +NH NN  Y   T+N      NF+Y
Sbjct: 1054 LLNYYYYYYYYYNNNNNNN--NNNNNHNNNANYLQHTNNNINNTNNFNY 1100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,204,845
Number of Sequences: 53049
Number of extensions: 174506
Number of successful extensions: 342
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)