Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1181X
(428 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 112 3e-24
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 102 3e-21
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 101 6e-21
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 90 2e-17
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 89 5e-17
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 88 8e-17
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 85 6e-16
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 79 5e-14
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 75 5e-13
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 68 1e-10
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 64 1e-09
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 62 6e-09
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 61 8e-09
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 6e-08
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 57 2e-07
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 56 3e-07
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 56 4e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 54 1e-06
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 53 3e-06
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 52 4e-06
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 51 9e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 51 1e-05
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 50 2e-05
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 4e-05
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 49 5e-05
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 49 5e-05
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 48 6e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 47 2e-04
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 47 2e-04
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 47 2e-04
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 46 4e-04
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 46 4e-04
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 46 4e-04
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 45 6e-04
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 45 8e-04
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 44 0.001
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 44 0.001
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 44 0.001
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 44 0.002
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 43 0.002
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 42 0.007
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 42 0.007
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 41 0.009
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 41 0.009
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 41 0.009
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 41 0.013
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 41 0.013
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 41 0.013
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 40 0.017
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 40 0.029
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 40 0.029
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 39 0.051
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 38 0.12
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 38 0.12
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 38 0.12
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 36 0.27
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 36 0.27
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 36 0.27
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 36 0.36
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 36 0.47
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 35 0.82
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 34 1.1
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 34 1.1
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 1.9
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 33 2.5
UniRef50_Q9BSM1 Cluster: Polycomb group RING finger protein 1; n... 33 2.5
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 32 4.4
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 32 5.8
UniRef50_Q55FZ6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_Q4RTJ7 Cluster: Chromosome 2 SCAF14997, whole genome sh... 31 7.7
UniRef50_A6F4D7 Cluster: Putative uncharacterized protein; n=1; ... 31 7.7
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 31 7.7
UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve; ... 31 7.7
UniRef50_Q0W6L0 Cluster: Predicted signal transduction protein; ... 31 7.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 112 bits (269), Expect = 3e-24
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+IDFFLG SL DEVLKIMPVQKQTRAG+RTRFKAFVAIGD NGH+GLGVKCSKEVATA
Sbjct: 93 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATA 150
Score = 61.7 bits (143), Expect = 6e-09
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE E
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 92
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 102 bits (245), Expect = 3e-21
Identities = 48/58 (82%), Positives = 51/58 (87%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+IDFFLG SL DEVLKIMPVQKQT AG+ TRFKAFV IGD NGH+GL VKCSKEVATA
Sbjct: 33 IIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATA 90
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3
Query: 159 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+PVTKLG L+ + KI LE IYLFSLPIKE E
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESE 32
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 101 bits (242), Expect = 6e-21
Identities = 46/77 (59%), Positives = 61/77 (79%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDN 376
K + E L + +++D+FL P LNDEV+K++PVQKQTRAG+RTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 377 NGHIGLGVKCSKEVATA 427
+GH+GLG+KC+KEVATA
Sbjct: 107 DGHVGLGIKCAKEVATA 123
Score = 64.9 bits (151), Expect = 7e-10
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQ 66
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 90.2 bits (214), Expect = 2e-17
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGL 394
+IDFFLG SL DEVLKIMPVQKQTRAG+RTRFKAFVAIGD NGH+GL
Sbjct: 68 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE E
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 67
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 88.6 bits (210), Expect = 5e-17
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
DEVLKIMPVQKQT AG+RTRF AFVAIGD NGH GLGVKCSKEVATA
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATA 94
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 87.8 bits (208), Expect = 8e-17
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +2
Query: 215 EHLLVF-FTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIG 391
EH+ +F + ++++ F+G L DEV+KI PVQKQT AG+R RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 392 LGVKCSKEVA 421
LGVK KEVA
Sbjct: 129 LGVKACKEVA 138
Score = 57.2 bits (132), Expect = 1e-07
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 141 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQ 82
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 85.0 bits (201), Expect = 6e-16
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ ++ID L P L DEV+ I PVQKQTRAG+RTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 422 TA 427
A
Sbjct: 123 GA 124
Score = 57.6 bits (133), Expect = 1e-07
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +3
Query: 144 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQ 67
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 78.6 bits (185), Expect = 5e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIG 391
+IDFFLG SL DEVLKIMPV+K+TRAG+RTRFKAFVAI D NG+ G
Sbjct: 21 IIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 32.3 bits (70), Expect = 4.4
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KIDKLESIYLFSLPIKEFE 254
KI LE IYLFSLPIKE E
Sbjct: 2 KIKSLEEIYLFSLPIKESE 20
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 75.4 bits (177), Expect = 5e-13
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
++D G S+ +EVL I VQKQTRAG++TR KA V +GD GH+G+G K SKE A+A
Sbjct: 54 IVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASA 111
Score = 40.3 bits (90), Expect = 0.017
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++++ EW+P T +GRLV+ KI LE I+ FS I+E E
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPE 53
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +2
Query: 251 RVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+++D FL +L +E L I PVQKQT AG++TRFKA+V +GD++ HIGLG K +KEV A
Sbjct: 96 QIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGA 153
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 32/36 (88%)
Frame = +3
Query: 147 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQ 96
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 64.1 bits (149), Expect = 1e-09
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFK 352
+IDFFLG SL DEVLKIMPVQKQTRAG+RTRFK
Sbjct: 93 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE E
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 92
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 61.7 bits (143), Expect = 6e-09
Identities = 31/62 (50%), Positives = 39/62 (62%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ V DF LG L D+VLK+M VQKQ +AG R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 422 TA 427
A
Sbjct: 210 IA 211
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 61.3 bits (142), Expect = 8e-09
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +2
Query: 314 QKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
QKQT+ G++ R K F GD NGH+GLG+KCSKEVATA
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATA 38
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 6e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 245
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFK 352
+IDFFLG SL +EVLK MPVQKQTRAG+ TRFK
Sbjct: 93 IIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 55.6 bits (128), Expect = 4e-07
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+P TKLG LV++ KI LE IYLFSLPIK E
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSE 92
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 56.0 bits (129), Expect = 3e-07
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ + DFFL SL D+VLKI+P+ + R + TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 422 TA 427
TA
Sbjct: 79 TA 80
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 55.6 bits (128), Expect = 4e-07
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = -2
Query: 427 GSGDFLAALHTQTNMPVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQGRPEEEIND 254
G G FLAAL QT++ V V +G++ LE L+GT L L HDL++ ++Q +EEI+D
Sbjct: 52 GGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDD 109
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 54.0 bits (124), Expect = 1e-06
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +2
Query: 239 NQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEV 418
N++ +I FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 419 ATA 427
ATA
Sbjct: 143 ATA 145
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 52.8 bits (121), Expect = 3e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2
Query: 338 RTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ RFKAFVAIGD+NG +G GVKCSKE ATA
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATA 90
Score = 33.5 bits (73), Expect = 1.9
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 144 DQKEWVPVTKLGRLVREGKI 203
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/58 (39%), Positives = 39/58 (67%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
++D L P L ++VL + VQ+ ++G R R++A V +G+ NG++G+G+ SKEV A
Sbjct: 49 IVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPA 105
Score = 31.9 bits (69), Expect = 5.8
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + + W P T++GR+V+EG I + I LP+ E E
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPE 48
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 51.2 bits (117), Expect = 9e-06
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ + ++D L P L+D+VL + +Q+ T +G R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 422 T 424
+
Sbjct: 80 S 80
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 272 GPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVA 119
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
P L EV+ + +QK T G+ TRFKA VA G+ NG++G+G SK++ A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIA 135
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 49.2 bits (112), Expect = 4e-05
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
W PVTKLGRLV++GK+ ++ I+ F + IKEFE
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFE 67
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 48.8 bits (111), Expect = 5e-05
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ V DF L L D+VLK+M V+KQ AG RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 422 TA 427
A
Sbjct: 76 IA 77
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 48.8 bits (111), Expect = 5e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
P L EV+ + +QK T G+ TRFKA VA G+ NG++G+G +K++ A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIA 116
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 48.4 bits (110), Expect = 6e-05
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = +2
Query: 227 VFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKC 406
+FF N ++ ++ G SL +V++ + V + T++G + + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKL--VNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 407 SKE 415
S +
Sbjct: 150 SMD 152
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +2
Query: 251 RVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGL 394
+++D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 66 QIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 42.3 bits (95), Expect = 0.004
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3
Query: 162 PVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
PVTKLGRLV++GK+ ++ I+ F + IKE++
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQ 66
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
++D L P L EV+ I VQKQT AGE +R+K V +G+ +G++ +G +K++ A
Sbjct: 46 IVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVA 102
Score = 37.5 bits (83), Expect = 0.12
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 150 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+EW P T +G LV+EGKI ++ ++ +LPI E E
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPE 45
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +2
Query: 251 RVIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+++D+ + P L DEV+ I Q+ T +G R + +G+ NG++G+G +KE A A
Sbjct: 37 QIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPA 94
Score = 36.7 bits (81), Expect = 0.20
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 150 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+EW P T+LGRLV G+I + LP+KE++
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQ 37
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 45.6 bits (103), Expect = 4e-04
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGV 400
+ID FLG +L DEVLK +P QK TR G+ +KA GD NGH+ G+
Sbjct: 81 IIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL 123
Score = 36.3 bits (80), Expect = 0.27
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 162 PVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
P +KLG LV++ +I L IYLFSLPIKE E
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETE 80
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 45.6 bits (103), Expect = 4e-04
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +3
Query: 147 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFESLISSSGRP 281
+ +W+P+TKLG LV+E KI LE IY FSL + SL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
Score = 41.1 bits (92), Expect = 0.009
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 308 PVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
P+ KQT ++TRFKA V +G + GH+ LG+K S EVA
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA 131
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 45.6 bits (103), Expect = 4e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
N EVL I + T +G R RF+ A+G+ +G++GLG+ KEV A
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIA 109
Score = 35.1 bits (77), Expect = 0.62
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 153 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
EW P TKLG +V+EG+I + I+ IKE E
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPE 48
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 45.2 bits (102), Expect = 6e-04
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
L + V+ + V K + G R RF A V +GD NGH+G G ++EV A
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEA 60
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 44.8 bits (101), Expect = 8e-04
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIG 391
++D L P L DEVL I VQ+ T +G R +F+ VA+G+ +G++G
Sbjct: 91 IVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLG 135
Score = 33.1 bits (72), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
W P T+LGR V+ G I +E LP+KE E
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAE 90
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ + V+KI + K T+ G RF A V IGD NG +G G+ S EV A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDA 97
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
P L ++V+KI + K + G R RF A V +GD G IG +KE+ A
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEA 63
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNA 74
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 260 DFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGV 400
D L ++ + ++I +K+T AG++TRFKAFV D NGH+ L V
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLEV 47
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 269 LGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIG 391
L P L DEVL I VQ+ T +G R +F+ VA+G+ +G IG
Sbjct: 44 LVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIG 84
Score = 34.7 bits (76), Expect = 0.82
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
W P T+LG+ V EG+ID ++ LP+KE E
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESE 39
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 41.5 bits (93), Expect = 0.007
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+I+FFLG L DEVL+ M Q Q RTR K F + + L V CSKEV TA
Sbjct: 52 IIEFFLGEHLKDEVLRTMLAQNQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTA 103
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 41.5 bits (93), Expect = 0.007
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAA 195
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 41.1 bits (92), Expect = 0.009
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAA 232
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 41.1 bits (92), Expect = 0.009
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+++L + K + G R RF A V +GD NG +G+G+ +KEV A
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVA 65
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 41.1 bits (92), Expect = 0.009
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +2
Query: 272 GPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
G L D V+ I V K + G F A V +GD NG +G+G S+EV A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAA 93
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 40.7 bits (91), Expect = 0.013
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 260 DFFLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATA 561
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 40.7 bits (91), Expect = 0.013
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
L ++++ + + K T+ G RF A IGD G++G G+ S EV A
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVA 126
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 40.7 bits (91), Expect = 0.013
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 167 HQTRPSCSRRKNRQTREHLLVFFT--NQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGER 340
++T + N QT+ F N+R + F ++V+ I V K T+ G
Sbjct: 3 NKTEVVVAENANNQTQPERKKFDRKPNRRPQGPKQFQKDDFEEKVVTIRRVTKVTKGGRH 62
Query: 341 TRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
RF A V +GD G +GLG + EV A
Sbjct: 63 FRFAAVVVVGDKKGQVGLGTGKANEVPEA 91
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 40.3 bits (90), Expect = 0.017
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = -2
Query: 250 NSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 143
NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 18 NSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 39.5 bits (88), Expect = 0.029
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ V+ I V K + G R F A V +GD NG +G+G +KEV A
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAA 90
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 39.5 bits (88), Expect = 0.029
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGA 114
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 38.7 bits (86), Expect = 0.051
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 314 QKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
QK+T G +TR++ +GD +GH+G+G+ S ++ A
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIA 109
Score = 38.3 bits (85), Expect = 0.067
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 150 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+EW P TKLGRLV+EGKI ++ I I+E E
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPE 39
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 37.5 bits (83), Expect = 0.12
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 272 GPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
G L ++++ I V K + G+R F A V +GD G +G G ++EV A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEA 107
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 37.5 bits (83), Expect = 0.12
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV A
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEA 63
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 37.5 bits (83), Expect = 0.12
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGV 400
+++LKI V K T+ G F A+GD G IGLG+
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGL 48
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 36.3 bits (80), Expect = 0.27
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+++V+KI V K + G R F A +GD G +G+G + EV A
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDA 78
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 36.3 bits (80), Expect = 0.27
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
L ++++ I V K + G R F A V +GD NG +G G+ + +V A
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEA 64
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 36.3 bits (80), Expect = 0.27
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
L + ++ + T+ G R F V +GD GH+G G +KEV A
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLA 76
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 35.9 bits (79), Expect = 0.36
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGA 65
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 35.5 bits (78), Expect = 0.47
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
D+++ I V K + G R F A V +GD G +G G ++EV A
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEA 70
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 34.7 bits (76), Expect = 0.82
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
L ++V+ I K + G R F A +GD NG +G+G + EV A
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDA 119
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 34.3 bits (75), Expect = 1.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -3
Query: 165 QEPTLSGLPCRAHDHGRDH-YRVHEDRHGLYLHRV-----IRNRRENRHVHRLEQRPPL 7
+EPT S CR+ GR H + R G HR+ IR+ R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.3 bits (75), Expect = 1.1
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 266 FLGPSLNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKE 415
++ L + L + V QT G+ F A V +GD NG +GLG S+E
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSRE 188
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.5 bits (73), Expect = 1.9
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Frame = -2
Query: 352 LETCALSGTCLFLYRHDLKNLI----IQGRPEEEINDSNSL 242
LE+CAL TC+ +Y HD+ ++ + + +E+++D++ L
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSDAHGL 1005
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 33.1 bits (72), Expect = 2.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIGLGVKCSKEVATA 427
L ++++ + V K + G F A +GD G +G+G S+EV A
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLA 69
>UniRef50_Q9BSM1 Cluster: Polycomb group RING finger protein 1;
n=21; Eumetazoa|Rep: Polycomb group RING finger protein
1 - Homo sapiens (Human)
Length = 247
Score = 33.1 bits (72), Expect = 2.5
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 165 QEPTLS--GLPCRAHDHGRDHYRVHEDRHGLYLHRVIRNRRENRHV 34
+EP LS GLP + DH + HY ++++ L L R+ + +N+ V
Sbjct: 129 EEPALSNLGLPFSSFDHSKAHYYRYDEQLNLCLERLSSGKDKNKSV 174
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 32.3 bits (70), Expect = 4.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 418 DFLAALHTQTNMPVVVANGNKCLET 344
+FL T+TNM + V+N NKC ET
Sbjct: 33 NFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 31.9 bits (69), Expect = 5.8
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 328 TCLFLYR-HDLKNLIIQGRPEEEIND 254
TCLF R HDL +LI++G +EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_Q55FZ6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1164
Score = 31.9 bits (69), Expect = 5.8
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -3
Query: 129 HDHGRDHYRVHEDRHGLYLHRVIRNRRENRHVHRLEQRPPLLN 1
H H H H+ +H + + RN + N+H+ Q P N
Sbjct: 667 HQHQHQHQHQHQHQHQQHQNHSFRNTQYNQHIFHQNQYPQFQN 709
>UniRef50_Q4RTJ7 Cluster: Chromosome 2 SCAF14997, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14997, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 125
Score = 31.5 bits (68), Expect = 7.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 129 HDHGRDHYRVHEDRHGLYLHRVIRNRRENRHVH 31
H+HG H HE HG H+ ++++ ++H H
Sbjct: 72 HEHGHGHGHGHEHGHGHKKHKKHKHKKGHKHDH 104
>UniRef50_A6F4D7 Cluster: Putative uncharacterized protein; n=1;
Marinobacter algicola DG893|Rep: Putative
uncharacterized protein - Marinobacter algicola DG893
Length = 144
Score = 31.5 bits (68), Expect = 7.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 129 HDHGRDHYRVHEDRHGLYLHRVIRNRRENRHVHR 28
H HG H + H+ RHG + H+ R+ ++RH +R
Sbjct: 79 HKHGWKHKKYHQKRHGYHGHK--RHWNKHRHHYR 110
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 31.5 bits (68), Expect = 7.7
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 221 LLVFFTNQRIRVIDFFLGPSLN---DEVLKIMPVQKQTRAGERTRFKAFVAIGDNNGHIG 391
LL+F N + ++ F+ N ++++I + K + G RFK + IG N IG
Sbjct: 110 LLIF--NYNLFLLFFYKTNKYNKILQKIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIG 167
Query: 392 LGV 400
+GV
Sbjct: 168 IGV 170
>UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve;
n=7; Eurotiomycetidae|Rep: CDF zinc transporter (Msc2),
putaitve - Aspergillus fumigatus (Sartorya fumigata)
Length = 877
Score = 31.5 bits (68), Expect = 7.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 129 HDHGRDHYRVHEDRHGLYLH 70
HDHG H +E+ HG++LH
Sbjct: 649 HDHGHSHSHGNENMHGIFLH 668
>UniRef50_Q0W6L0 Cluster: Predicted signal transduction protein;
n=1; uncultured methanogenic archaeon RC-I|Rep:
Predicted signal transduction protein - Uncultured
methanogenic archaeon RC-I
Length = 992
Score = 31.5 bits (68), Expect = 7.7
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -2
Query: 397 TQTNMPVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQGRPEEEINDS-NSLIGKENK* 221
++ N + + N C+ T L+GTC +L + + P++ +N N+L+ +E+
Sbjct: 313 SEENYRAITTSVNDCILTTDLTGTCTYL--NPRVTELTGYAPDDILNTPVNNLVAEESGE 370
Query: 220 MLSSLSIFPSRTRRPSLVTGTHS 152
++SS+ SR R S+ H+
Sbjct: 371 IVSSILSSVSRDERRSVEIWIHA 393
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,839,504
Number of Sequences: 1657284
Number of extensions: 7545504
Number of successful extensions: 24617
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 23171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24461
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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