Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1180
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4W9G5 Cluster: Glutathione S-transferase family protei...    35   2.4  
UniRef50_A6SRH7 Cluster: Putative uncharacterized protein; n=1; ...    35   2.4  

>UniRef50_Q4W9G5 Cluster: Glutathione S-transferase family protein;
           n=3; Trichocomaceae|Rep: Glutathione S-transferase
           family protein - Aspergillus fumigatus (Sartorya
           fumigata)
          Length = 230

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 130 TNEVNDLPRAPGLITHENTQGEIF--LFFLRFLSSKTLAVSTS 8
           T++VN   R PGLI HEN    +F     L++L+ KT+   TS
Sbjct: 50  TSKVNPNGRVPGLIDHENNDFTVFESAAILQYLAEKTIQYDTS 92


>UniRef50_A6SRH7 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 697

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -3

Query: 677 LPHPSNRNALLLHGANRQGDGTHPRGLTRGPTTSKYTYILQVKLNIYMNSSTRIY 513
           L  PS  +    H   R  D + PR  T  PT SK   ILQ ++ I + +S+ +Y
Sbjct: 60  LAGPSQASRSRRHSLERGFDSSSPRRGTASPTPSKAAKILQAQVGIPLRTSSSLY 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,223,115
Number of Sequences: 1657284
Number of extensions: 14624722
Number of successful extensions: 34833
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34822
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)