Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1180
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.84 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.9  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   7.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 243 IEVSTESHCGKYKRIKKMKFFVK 311
           +E S+E +C     +KK+KF +K
Sbjct: 64  LENSSEENCVSMSNLKKLKFLLK 86


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 33  LERKRRKNKKISPCVFSWVIR 95
           +E +  + K+ +P +FSW IR
Sbjct: 117 VENRIEQYKRENPSIFSWEIR 137


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 291 FLCVYISHNDFRYLLQ**KSLWCYLRFVYVKILLQQNQLPVSNKQTFI 148
           F  VY  +N F   +     L+C L+F    ++L +  + VSN   F+
Sbjct: 66  FRFVYAVYNIFGAFVM---GLFCILKFALDGLMLDKTGICVSNVFDFV 110


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 374 ENITSKLLSKTF-QNISHSPNSFDKKLHFFYAFIFP 270
           EN  S+     F + +  S   F  + +F YAF+ P
Sbjct: 26  ENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAP 61


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 374 ENITSKLLSKTF-QNISHSPNSFDKKLHFFYAFIFP 270
           EN  S+     F + +  S   F  + +F YAF+ P
Sbjct: 259 ENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAP 294


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 374 ENITSKLLSKTF-QNISHSPNSFDKKLHFFYAFIFP 270
           EN  S+     F + +  S   F  + +F YAF+ P
Sbjct: 259 ENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAP 294


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 667 LQTETHYCFTEQIGRAMVPTHADSQEV 587
           +QT+        +G+  +PT+ D QE+
Sbjct: 18  IQTKVREEILSVVGKEKIPTYNDLQEL 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,475
Number of Sequences: 336
Number of extensions: 4034
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)