Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1180
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132751-1|AAI32752.1|  482|Homo sapiens chromosome 7 open readi...    30   10.0 
BC132749-1|AAI32750.1|  482|Homo sapiens chromosome 7 open readi...    30   10.0 
BC010130-1|AAH10130.1|  482|Homo sapiens chromosome 7 open readi...    30   10.0 
AF151801-1|AAD34038.1|  483|Homo sapiens CGI-43 protein protein.       30   10.0 
AC079882-1|AAQ93370.1|  482|Homo sapiens unknown protein.              30   10.0 
AC004983-1|AAQ96868.1|  482|Homo sapiens unknown protein.              30   10.0 

>BC132751-1|AAI32752.1|  482|Homo sapiens chromosome 7 open reading
           frame 28A protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 202 KNTSAAKSTPSVQQTNIHRDKLKLTNEVN 116
           K+T   + TPSV  T++H D +K+  ++N
Sbjct: 389 KSTVHMRKTPSVSLTSVHPDLMKILGDIN 417


>BC132749-1|AAI32750.1|  482|Homo sapiens chromosome 7 open reading
           frame 28A protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 202 KNTSAAKSTPSVQQTNIHRDKLKLTNEVN 116
           K+T   + TPSV  T++H D +K+  ++N
Sbjct: 389 KSTVHMRKTPSVSLTSVHPDLMKILGDIN 417


>BC010130-1|AAH10130.1|  482|Homo sapiens chromosome 7 open reading
           frame 28B protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 202 KNTSAAKSTPSVQQTNIHRDKLKLTNEVN 116
           K+T   + TPSV  T++H D +K+  ++N
Sbjct: 389 KSTVHMRKTPSVSLTSVHPDLMKILGDIN 417


>AF151801-1|AAD34038.1|  483|Homo sapiens CGI-43 protein protein.
          Length = 483

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 202 KNTSAAKSTPSVQQTNIHRDKLKLTNEVN 116
           K+T   + TPSV  T++H D +K+  ++N
Sbjct: 390 KSTVHMRKTPSVSLTSVHPDLMKILGDIN 418


>AC079882-1|AAQ93370.1|  482|Homo sapiens unknown protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 202 KNTSAAKSTPSVQQTNIHRDKLKLTNEVN 116
           K+T   + TPSV  T++H D +K+  ++N
Sbjct: 389 KSTVHMRKTPSVSLTSVHPDLMKILGDIN 417


>AC004983-1|AAQ96868.1|  482|Homo sapiens unknown protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 202 KNTSAAKSTPSVQQTNIHRDKLKLTNEVN 116
           K+T   + TPSV  T++H D +K+  ++N
Sbjct: 389 KSTVHMRKTPSVSLTSVHPDLMKILGDIN 417


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,820,330
Number of Sequences: 237096
Number of extensions: 2131705
Number of successful extensions: 3732
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3732
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)