BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1178 (752 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 25 3.3 AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 4.4 AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox transcrip... 24 5.8 AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 23 7.7 AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 23 7.7 >AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B protein. Length = 755 Score = 24.6 bits (51), Expect = 3.3 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Frame = -1 Query: 146 RRAFLRLTKERHSIKATWAGDISNYVYIRLY-----FWINYCNFQYH 21 RR L +K T A + YV +R +W+ +C+FQ+H Sbjct: 672 RRGLLNRQFNLPPLKDTIAVPNNGYVVLRFRADNPGYWLFHCHFQFH 718 >AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein protein. Length = 699 Score = 24.2 bits (50), Expect = 4.4 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -2 Query: 289 LFVVLHQMYHKAIFNQYQILAHVFLSFFSFLITPL 185 LFV+ ++ + +F + LA V LS F FLITP+ Sbjct: 297 LFVIKISLF-RTVFLRLSSLA-VLLSRFYFLITPM 329 >AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox transcription factor protein. Length = 185 Score = 23.8 bits (49), Expect = 5.8 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = -1 Query: 95 WAGDISNYVYIRLYFWINYCNFQYHD 18 W+ S+Y + + Y+ NY N+ H+ Sbjct: 129 WSYPHSHYSHNQYYYMQNYSNYSQHN 154 >AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A protein. Length = 753 Score = 23.4 bits (48), Expect = 7.7 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -1 Query: 146 RRAFLRLTKERHSIKATWAGDISNYVYIRLY-----FWINYCNFQYH 21 RR L +K T A + YV +R FW+ +C+F +H Sbjct: 672 RRGLLHRQYNLPPLKDTIAVPNNGYVVLRFRADNPGFWLFHCHFLFH 718 >AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein protein. Length = 942 Score = 23.4 bits (48), Expect = 7.7 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 Query: 125 TKERHSIKATWAGDISNYVYIRL 57 T +RH K T GD+ NY+ IR+ Sbjct: 644 TLKRH-FKITTLGDVRNYLGIRI 665 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 713,498 Number of Sequences: 2352 Number of extensions: 12800 Number of successful extensions: 30 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 30 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 77755161 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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