Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1178
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128438-1|AAM75031.1|  339|Drosophila melanogaster LD09950p pro...   151   1e-36
AE014296-2775|AAF49432.1|  339|Drosophila melanogaster CG4083-PA...   151   1e-36
AB000402-1|BAA19098.1|  339|Drosophila melanogaster DMO25 protein.    151   1e-36
AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydro...    31   1.7  

>AY128438-1|AAM75031.1|  339|Drosophila melanogaster LD09950p
           protein.
          Length = 339

 Score =  151 bits (366), Expect = 1e-36
 Identities = 72/82 (87%), Positives = 77/82 (93%), Gaps = 1/82 (1%)
 Frame = +3

Query: 510 EIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKI 689
           EIA N GTMLRECARYEALAKIML+SD+F+ FFRYVEVSTFDIASDAFSTFKELLTRHK+
Sbjct: 137 EIALNSGTMLRECARYEALAKIMLHSDEFFKFFRYVEVSTFDIASDAFSTFKELLTRHKL 196

Query: 690 LCAEFLEANYDKVFS-HYQRLL 752
           LCAEFL+ANYDK FS HYQRLL
Sbjct: 197 LCAEFLDANYDKFFSQHYQRLL 218



 Score =  124 bits (300), Expect = 1e-28
 Identities = 59/83 (71%), Positives = 65/83 (78%)
 Frame = +1

Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
           LYG+SDAEP  D +VAQL+QE+Y             RIDFEGKK VA +FNNVLRRQIGT
Sbjct: 50  LYGSSDAEPPADYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNVLRRQIGT 109

Query: 436 RSPTVEYICTKPEILFTLMSGYE 504
           RSPTVEYICTKPEILFTLM+GYE
Sbjct: 110 RSPTVEYICTKPEILFTLMAGYE 132



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +2

Query: 134 EKPCGVVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKN 253
           + P  +V+SLK+A+ ALE GD+K EKAQEDVSKNLV IKN
Sbjct: 9   KSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKN 48



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 111 MPLFGKSQKSPAELL 155
           MPLFGKSQKSP EL+
Sbjct: 1   MPLFGKSQKSPVELV 15


>AE014296-2775|AAF49432.1|  339|Drosophila melanogaster CG4083-PA
           protein.
          Length = 339

 Score =  151 bits (366), Expect = 1e-36
 Identities = 72/82 (87%), Positives = 77/82 (93%), Gaps = 1/82 (1%)
 Frame = +3

Query: 510 EIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKI 689
           EIA N GTMLRECARYEALAKIML+SD+F+ FFRYVEVSTFDIASDAFSTFKELLTRHK+
Sbjct: 137 EIALNSGTMLRECARYEALAKIMLHSDEFFKFFRYVEVSTFDIASDAFSTFKELLTRHKL 196

Query: 690 LCAEFLEANYDKVFS-HYQRLL 752
           LCAEFL+ANYDK FS HYQRLL
Sbjct: 197 LCAEFLDANYDKFFSQHYQRLL 218



 Score =  124 bits (300), Expect = 1e-28
 Identities = 59/83 (71%), Positives = 65/83 (78%)
 Frame = +1

Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
           LYG+SDAEP  D +VAQL+QE+Y             RIDFEGKK VA +FNNVLRRQIGT
Sbjct: 50  LYGSSDAEPPADYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNVLRRQIGT 109

Query: 436 RSPTVEYICTKPEILFTLMSGYE 504
           RSPTVEYICTKPEILFTLM+GYE
Sbjct: 110 RSPTVEYICTKPEILFTLMAGYE 132



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +2

Query: 134 EKPCGVVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKN 253
           + P  +V+SLK+A+ ALE GD+K EKAQEDVSKNLV IKN
Sbjct: 9   KSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKN 48



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 111 MPLFGKSQKSPAELL 155
           MPLFGKSQKSP EL+
Sbjct: 1   MPLFGKSQKSPVELV 15


>AB000402-1|BAA19098.1|  339|Drosophila melanogaster DMO25 protein.
          Length = 339

 Score =  151 bits (366), Expect = 1e-36
 Identities = 72/82 (87%), Positives = 77/82 (93%), Gaps = 1/82 (1%)
 Frame = +3

Query: 510 EIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKI 689
           EIA N GTMLRECARYEALAKIML+SD+F+ FFRYVEVSTFDIASDAFSTFKELLTRHK+
Sbjct: 137 EIALNSGTMLRECARYEALAKIMLHSDEFFKFFRYVEVSTFDIASDAFSTFKELLTRHKL 196

Query: 690 LCAEFLEANYDKVFS-HYQRLL 752
           LCAEFL+ANYDK FS HYQRLL
Sbjct: 197 LCAEFLDANYDKFFSQHYQRLL 218



 Score =  121 bits (292), Expect = 9e-28
 Identities = 57/83 (68%), Positives = 65/83 (78%)
 Frame = +1

Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
           L+G+SDAEP  D +VAQL+QE+Y             RIDFEGKK VA +FNN+LRRQIGT
Sbjct: 50  LHGSSDAEPPADYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNLLRRQIGT 109

Query: 436 RSPTVEYICTKPEILFTLMSGYE 504
           RSPTVEYICTKPEILFTLM+GYE
Sbjct: 110 RSPTVEYICTKPEILFTLMAGYE 132



 Score = 58.8 bits (136), Expect = 7e-09
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +2

Query: 134 EKPCGVVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNSFMVH 268
           + P  +V+SLK+A+ ALE GD+K EKAQEDVSKNLV IKN  M+H
Sbjct: 9   KSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKN--MLH 51



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 111 MPLFGKSQKSPAELL 155
           MPLFGKSQKSP EL+
Sbjct: 1   MPLFGKSQKSPVELV 15


>AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydrogen
           exchanger protein protein.
          Length = 1203

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
 Frame = -1

Query: 245 SVPNSCSRLLELFQLSYHPSLKPSR----HLLTI*QLR--RAFLRLTKERHSIKATWAGD 84
           ++ N+CSR L++ +L Y+PS K       H L   +L+  R   RL+  RH++      D
Sbjct: 705 NLDNTCSRNLDMAELDYNPSKKDLTDARIHHLLAEELKPYRRHRRLSYSRHAVDDR---D 761

Query: 83  ISNYVYIRLYFWINYCNFQYHDNSH 9
           +S  V +     +N+    ++D  H
Sbjct: 762 LSTQVQVNYKMQMNF-RRMFNDRKH 785


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,581,937
Number of Sequences: 53049
Number of extensions: 561474
Number of successful extensions: 1060
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)