Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1178
(752 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g18940.1 68418.m02249 Mo25 family protein similar to SP|Q0613... 97 1e-20
At5g18940.2 68418.m02250 Mo25 family protein similar to SP|Q0613... 90 2e-18
At5g47540.1 68418.m05869 Mo25 family protein similar to MO25 pro... 83 1e-16
At4g17270.1 68417.m02596 Mo25 family protein similar to MO25 pro... 83 3e-16
At2g03410.1 68415.m00299 Mo25 family protein similar to MO25 pro... 77 2e-14
At4g16015.1 68417.m02430 DC1 domain-containing protein contains ... 29 2.5
>At5g18940.1 68418.m02249 Mo25 family protein similar to SP|Q06138
MO25 protein {Mus musculus}; contains Pfam profile
PF03204: Mo25 protein family
Length = 345
Score = 96.7 bits (230), Expect = 1e-20
Identities = 44/81 (54%), Positives = 62/81 (76%)
Frame = +3
Query: 510 EIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKI 689
EIA +CG+MLREC ++ +LAK +L S F FF++VE+ FD+ASDAFSTFK+LLT+H
Sbjct: 141 EIALHCGSMLRECIKFPSLAKYILESACFELFFKFVELPNFDVASDAFSTFKDLLTKHDS 200
Query: 690 LCAEFLEANYDKVFSHYQRLL 752
+ +EFL ++Y + F Y+RLL
Sbjct: 201 VVSEFLTSHYTEFFDVYERLL 221
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +1
Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
L G + EP D V QLA E + +E +KD+ ++ +L++++G
Sbjct: 57 LSGDGETEPNADQAV-QLALEFCKEDVVSLVIHKLHILGWETRKDLLHCWSILLKQKVGD 115
Query: 436 RSPTVEYICTKPEILFTLMSGYEHQ 510
V+Y E+L +L+ Y+++
Sbjct: 116 TYCCVQYFEEHFELLDSLVVCYDNK 140
>At5g18940.2 68418.m02250 Mo25 family protein similar to SP|Q06138
MO25 protein {Mus musculus}; contains Pfam profile
PF03204: Mo25 protein family
Length = 323
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/77 (51%), Positives = 59/77 (76%)
Frame = +3
Query: 510 EIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKI 689
EIA +CG+MLREC ++ +LAK +L S F FF++VE+ FD+ASDAFSTFK+LLT+H
Sbjct: 141 EIALHCGSMLRECIKFPSLAKYILESACFELFFKFVELPNFDVASDAFSTFKDLLTKHDS 200
Query: 690 LCAEFLEANYDKVFSHY 740
+ +EFL ++Y ++ S +
Sbjct: 201 VVSEFLTSHYTELLSDF 217
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +1
Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
L G + EP D V QLA E + +E +KD+ ++ +L++++G
Sbjct: 57 LSGDGETEPNADQAV-QLALEFCKEDVVSLVIHKLHILGWETRKDLLHCWSILLKQKVGD 115
Query: 436 RSPTVEYICTKPEILFTLMSGYEHQ 510
V+Y E+L +L+ Y+++
Sbjct: 116 TYCCVQYFEEHFELLDSLVVCYDNK 140
>At5g47540.1 68418.m05869 Mo25 family protein similar to MO25
protein (early mouse development protein family) [Mouse]
SWISS-PROT:Q06138
Length = 344
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +3
Query: 507 SEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHK 686
+++A + G M REC R++ +AK +L SD FF Y+++ FDIA+DA +TFKELLTRHK
Sbjct: 142 TDMALHYGAMFRECIRHQIVAKYVLESDHVKKFFDYIQLPNFDIAADAAATFKELLTRHK 201
Query: 687 ILCAEFLEANYDKVFSHYQRLL 752
AEFL N D F+ Y L
Sbjct: 202 STVAEFLTKNEDWFFADYNSKL 223
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +1
Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
LYG S+AEP + AQL QE + +++ E +KD QV N+ R+Q+ +
Sbjct: 58 LYGNSEAEPVAEAC-AQLTQEFFKEDTLRLLITCLPKLNLETRKDATQVVANLQRQQVNS 116
Query: 436 RSPTVEYICTKPEILFTLMSG 498
R +Y+ +++ L+ G
Sbjct: 117 RLIASDYLEANIDLMDVLIEG 137
>At4g17270.1 68417.m02596 Mo25 family protein similar to MO25
protein (early mouse development protein family) [Mouse]
SWISS-PROT:Q06138
Length = 343
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +3
Query: 507 SEIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHK 686
+++A + GTM REC R++ +AK +L S+ FF Y+++ FDIA+DA +TFKELLTRHK
Sbjct: 141 TDMALHYGTMFRECIRHQIVAKYVLDSEHVKKFFYYIQLPNFDIAADAAATFKELLTRHK 200
Query: 687 ILCAEFLEANYDKVFSHYQRLL 752
AEFL N D F+ Y L
Sbjct: 201 STVAEFLIKNEDWFFADYNSKL 222
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = +1
Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
LYG S+AEP + AQL QE + ++ E +KD QV N+ R+Q+ +
Sbjct: 58 LYGNSEAEPVAEAC-AQLTQEFFKADTLRRLLTSLPNLNLEARKDATQVVANLQRQQVNS 116
Query: 436 RSPTVEYICTKPEILFTLMSGYEH 507
R +Y+ + +++ L+ G+E+
Sbjct: 117 RLIAADYLESNIDLMDFLVDGFEN 140
>At2g03410.1 68415.m00299 Mo25 family protein similar to MO25
protein (early mouse development protein family) [Mouse]
SWISS-PROT:Q06138
Length = 348
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +3
Query: 510 EIASNCGTMLRECARYEALAKIMLYSDDFYNFFRYVEVSTFDIASDAFSTFKELLTRHKI 689
E+A + ML+EC R++ +AK +L S + FF YV++ FD+A+DA F+ELLTRHK
Sbjct: 143 ELALHYTGMLKECVRHQVVAKYILESKNLEKFFDYVQLPYFDVATDASKIFRELLTRHKS 202
Query: 690 LCAEFLEANYDKVFSHYQRLL 752
AE+L NY+ F+ Y L
Sbjct: 203 TVAEYLAKNYEWFFAEYNTKL 223
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/84 (26%), Positives = 42/84 (50%)
Frame = +1
Query: 256 LYGTSDAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGT 435
LYG +AEP + + L QE + ++D E +KD Q+ N+ ++Q+
Sbjct: 58 LYGNGEAEPVPEACLL-LTQEFFRADTLRPLIKSIPKLDLEARKDATQIVANLQKQQVEF 116
Query: 436 RSPTVEYICTKPEILFTLMSGYEH 507
R EY+ + +++ +L+ G +H
Sbjct: 117 RLVASEYLESNLDVIDSLVEGIDH 140
>At4g16015.1 68417.m02430 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 535
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 389 SFFPSKSIRFKFCIKSSNKLVLYISCANCATMISV 285
S + S+S KFCI +K + +SC C ++ +
Sbjct: 371 SLYISRSTEEKFCIACGDKATMVLSCEECDFILDI 405
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,475,148
Number of Sequences: 28952
Number of extensions: 275575
Number of successful extensions: 681
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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