Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1177
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3244|AAF46744.1|  110|Drosophila melanogaster CG10320-P...    81   4e-16
BT023211-1|AAY55627.1|  425|Drosophila melanogaster IP10727p pro...    28   5.4  
AE013599-2989|AAF57488.2|  425|Drosophila melanogaster CG11788-P...    28   5.4  

>AE013599-3244|AAF46744.1|  110|Drosophila melanogaster CG10320-PA
           protein.
          Length = 110

 Score = 81.4 bits (192), Expect = 4e-16
 Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +3

Query: 51  YTVPHYSQFTVKGIPQLDELEKALAVKGLKDPWIRNEAWRYHP-GFGTRWQRARKFFFRG 227
           YTVPH S + V+ +PQL E+++AL  +GLKDPW+RNE WRY P  FGT   R   F FRG
Sbjct: 9   YTVPHASTYKVESVPQLVEVKEALGRQGLKDPWLRNEVWRYEPKAFGTHRSRLNTFLFRG 68

Query: 228 FPIG 239
             +G
Sbjct: 69  LGVG 72


>BT023211-1|AAY55627.1|  425|Drosophila melanogaster IP10727p
           protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 19  KQWVVTDMGPRTQCLTTPSL 78
           K+W + +M P  +C TTP+L
Sbjct: 381 KRWTMEEMEPYIECFTTPNL 400


>AE013599-2989|AAF57488.2|  425|Drosophila melanogaster CG11788-PA
           protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 19  KQWVVTDMGPRTQCLTTPSL 78
           K+W + +M P  +C TTP+L
Sbjct: 381 KRWTMEEMEPYIECFTTPNL 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,487,242
Number of Sequences: 53049
Number of extensions: 361736
Number of successful extensions: 1042
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)