Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1175
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   7.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   7.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 307 LYDEMTFNCFFCLSSNIIPNYLKNLS 230
           LY+  + + F   SS++ PNY++  S
Sbjct: 46  LYNTSSVSNFNESSSSVFPNYIRTTS 71


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 307 LYDEMTFNCFFCLSSNIIPNYLKNLS 230
           LY+  + + F   SS++ PNY++  S
Sbjct: 46  LYNTSSVSNFNESSSSVFPNYIRTTS 71


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 536  LHIIWPFLSKTRL 498
            LHI WPF  KT +
Sbjct: 1293 LHIKWPFGVKTNI 1305


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 536  LHIIWPFLSKTRL 498
            LHI WPF  KT +
Sbjct: 1293 LHIKWPFGVKTNI 1305


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 107 N*LYLSLYTPH*QMSRDRV 51
           N LYL++YT H   S D V
Sbjct: 97  NCLYLTIYTTHVNASFDVV 115


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 107 N*LYLSLYTPH*QMSRDRV 51
           N LYL++YT H   S D V
Sbjct: 97  NCLYLTIYTTHVNASFDVV 115


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 107 N*LYLSLYTPH*QMSRDRV 51
           N LYL++YT H   S D V
Sbjct: 97  NCLYLTIYTTHVNASFDVV 115


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 107 N*LYLSLYTPH*QMSRDRV 51
           N LYL++YT H   S D V
Sbjct: 97  NCLYLTIYTTHVNASFDVV 115


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 107 N*LYLSLYTPH*QMSRDRV 51
           N LYL++YT H   S D V
Sbjct: 97  NCLYLTIYTTHVNASFDVV 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,349
Number of Sequences: 336
Number of extensions: 2020
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)