Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1175
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    24   4.1  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   5.5  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.2  

>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 527 IWPFLSKTRLPEVQLILN 474
           +W FL KT+LP  + ++N
Sbjct: 19  LWIFLEKTKLPYEKCLIN 36


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 461 FKTAYNYIFFCFYAIFSV 408
           F T Y + F C Y  F +
Sbjct: 226 FSTCYTFTFICLYLFFII 243


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 36  SIGFGNSVARHLLVGRVKREIQLISTKLS 122
           S GFG  +  HLL    +RE++L+ + +S
Sbjct: 717 SKGFGELILSHLLRPFDERELELLISGIS 745


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,910
Number of Sequences: 2352
Number of extensions: 8176
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)