Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1174
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7JW12 Cluster: LD01519p; n=7; Endopterygota|Rep: LD015...    69   1e-10
UniRef50_Q18484 Cluster: Putative uncharacterized protein; n=2; ...    54   3e-06
UniRef50_Q8NBP9 Cluster: Thioredoxin domain-containing protein 1...    50   4e-05
UniRef50_Q53G73 Cluster: Thioredoxin-related transmembrane prote...    50   5e-05
UniRef50_UPI0000E46A92 Cluster: PREDICTED: similar to MGC79568 p...    48   2e-04
UniRef50_A7RXF6 Cluster: Predicted protein; n=1; Nematostella ve...    46   7e-04
UniRef50_Q01GG0 Cluster: Thioredoxin-like protein; n=2; Ostreoco...    37   0.41 
UniRef50_Q7JVE7 Cluster: LP02768p; n=5; Endopterygota|Rep: LP027...    33   8.8  
UniRef50_O96879 Cluster: Saliva; n=1; Drosophila melanogaster|Re...    33   8.8  

>UniRef50_Q7JW12 Cluster: LD01519p; n=7; Endopterygota|Rep: LD01519p
           - Drosophila melanogaster (Fruit fly)
          Length = 271

 Score = 68.9 bits (161), Expect = 1e-10
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = +1

Query: 10  SRQLPTVMVMSEGREKMRRPXPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKL 174
           SRQLPTV++  +G+E  RRP  DS GKLQKF FS DN++A F L+ LY E  E+L
Sbjct: 206 SRQLPTVILFQQGKETDRRPCVDSKGKLQKFFFSSDNVRATFGLNQLYKEAIERL 260


>UniRef50_Q18484 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 265

 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = +1

Query: 4   PTSRQLPTVMVMSEGREKMRRPXPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKLASF 183
           P SRQLPT+ V  + +E  RRP  + + +   F+FS++N   AFDL  LY E KEK  + 
Sbjct: 201 PMSRQLPTICVFKDAKEIARRPLVNDSRRAVPFVFSEENCVLAFDLLNLYNEQKEKKGA- 259

Query: 184 RQNKKD 201
           +  K+D
Sbjct: 260 KAKKED 265


>UniRef50_Q8NBP9 Cluster: Thioredoxin domain-containing protein 14;
           n=19; Euteleostomi|Rep: Thioredoxin domain-containing
           protein 14 - Homo sapiens (Human)
          Length = 372

 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 25/67 (37%), Positives = 40/67 (59%)
 Frame = +1

Query: 4   PTSRQLPTVMVMSEGREKMRRPXPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKLASF 183
           P ++QLPT+++   G+E MRRP  D  G+   + FS++N+   F+L+ LY   K KL+  
Sbjct: 212 PLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSEENVIREFNLNELYQRAK-KLSKA 270

Query: 184 RQNKKDE 204
             N  +E
Sbjct: 271 GDNIPEE 277


>UniRef50_Q53G73 Cluster: Thioredoxin-related transmembrane protein
           2 variant; n=22; Euteleostomi|Rep: Thioredoxin-related
           transmembrane protein 2 variant - Homo sapiens (Human)
          Length = 296

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = +1

Query: 4   PTSRQLPTVMVMSEGREKMRRPXPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKLASF 183
           P ++QLPT+++   G+E MRRP  D  G+   + FS++N+   F+L  LY   K KL+  
Sbjct: 212 PLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSEENVIREFNLSELYQRAK-KLSKA 270

Query: 184 RQNKKDE 204
             N  +E
Sbjct: 271 GDNIPEE 277


>UniRef50_UPI0000E46A92 Cluster: PREDICTED: similar to MGC79568
           protein, partial; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to MGC79568 protein,
           partial - Strongylocentrotus purpuratus
          Length = 224

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 26/71 (36%), Positives = 41/71 (57%)
 Frame = +1

Query: 10  SRQLPTVMVMSEGREKMRRPXPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKLASFRQ 189
           ++QLPT+++   G+E MR+P  +  G+  ++ F K ++   FDLD L+A  K K     Q
Sbjct: 151 TKQLPTMVLFQGGKEVMRKPGRNKNGQTVRYEFKKADIIRDFDLDRLFASTKSK----SQ 206

Query: 190 NKKDE*TATAQ 222
            K D+  A AQ
Sbjct: 207 KKADKQEAKAQ 217


>UniRef50_A7RXF6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 272

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
 Frame = +1

Query: 10  SRQLPTVMVMSEGREKMRRPXPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKLA---S 180
           S+QLPTV+V   G+E  R+P  DS   +  + F+++ M   F++  LY   K+K A   S
Sbjct: 204 SKQLPTVIVFEGGKEIKRKPSVDSRAVISPYTFTEEKMIRDFNIGDLYDVAKKKAARSES 263

Query: 181 FRQNKKDE 204
            R  +K E
Sbjct: 264 LRSEQKKE 271


>UniRef50_Q01GG0 Cluster: Thioredoxin-like protein; n=2;
           Ostreococcus|Rep: Thioredoxin-like protein -
           Ostreococcus tauri
          Length = 726

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = +1

Query: 7   TSRQLPTVMVMSEGREKMRRPXPDSTGKLQKFLFSKDNMKAAFDLD 144
           TS+QLPT+++  +G+E MR P     G++ +      ++ AAF LD
Sbjct: 664 TSKQLPTLILFEKGKETMRIPHVYRDGRIARSRLRASDLIAAFGLD 709


>UniRef50_Q7JVE7 Cluster: LP02768p; n=5; Endopterygota|Rep: LP02768p
           - Drosophila melanogaster (Fruit fly)
          Length = 226

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 276 ICGFSFCSFWLRHGL*ISQCQII 344
           ICGF  CSFWLR+G+  ++  I+
Sbjct: 47  ICGFLSCSFWLRYGVLTNEQSIV 69


>UniRef50_O96879 Cluster: Saliva; n=1; Drosophila melanogaster|Rep:
           Saliva - Drosophila melanogaster (Fruit fly)
          Length = 226

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 276 ICGFSFCSFWLRHGL*ISQCQII 344
           ICGF  CSFWLR+G+  ++  I+
Sbjct: 47  ICGFLSCSFWLRYGVLTNEQSIV 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,099,641
Number of Sequences: 1657284
Number of extensions: 11332690
Number of successful extensions: 26329
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26322
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)