Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1172X
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK090457-1|BAC03438.1| 855|Homo sapiens FLJ00378 protein protein. 35 0.14
BC060777-1|AAH60777.1| 129|Homo sapiens C1orf96 protein protein. 34 0.24
BC039241-1|AAH39241.1| 140|Homo sapiens C1orf96 protein protein. 34 0.24
BC033513-1|AAH33513.1| 265|Homo sapiens Unknown (protein for IM... 34 0.24
BC015419-1|AAH15419.1| 270|Homo sapiens chromosome 1 open readi... 34 0.24
AL117350-3|CAI22869.1| 270|Homo sapiens chromosome 1 open readi... 34 0.24
CR381696-3|CAI95411.1| 266|Homo sapiens dehydrogenase/reductase... 34 0.32
BX649443-3|CAI95432.1| 266|Homo sapiens dehydrogenase/reductase... 34 0.32
BC071609-1|AAH71609.1| 270|Homo sapiens chromosome 1 open readi... 33 0.42
BC013906-1|AAH13906.1| 316|Homo sapiens FLJ36031 protein protein. 32 0.98
AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein. 32 1.3
AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protei... 32 1.3
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 1.7
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 1.7
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 1.7
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 1.7
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 1.7
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 1.7
AK022417-1|BAB14032.1| 156|Homo sapiens protein ( Homo sapiens ... 31 2.3
AB029488-1|BAA89482.1| 132|Homo sapiens C11orf21 protein. 31 2.3
X79201-1|CAA55792.1| 391|Homo sapiens SYT protein. 31 3.0
CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein. 31 3.0
CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein. 31 3.0
BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma transl... 31 3.0
BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma transl... 31 3.0
AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2... 31 3.0
AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1... 31 3.0
BC036690-1|AAH36690.1| 687|Homo sapiens LMTK3 protein protein. 30 3.9
BC025767-1|AAH25767.1| 670|Homo sapiens rhophilin, Rho GTPase b... 30 3.9
AY082588-1|AAL89809.1| 695|Homo sapiens rhophilin-1 protein. 30 3.9
AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin receptor-i... 30 3.9
AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor i... 30 3.9
AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein. 30 3.9
U16031-1|AAA57193.1| 847|Homo sapiens IL-4 Stat protein. 30 5.2
BC075852-1|AAH75852.1| 847|Homo sapiens signal transducer and a... 30 5.2
AY615283-1|AAU04439.1| 404|Homo sapiens STAT6B protein. 30 5.2
AK128263-1|BAC87359.1| 198|Homo sapiens protein ( Homo sapiens ... 30 5.2
AF417842-1|AAL06595.1| 847|Homo sapiens signal transducer and a... 30 5.2
AF067575-1|AAC67525.1| 847|Homo sapiens signal transducer and a... 30 5.2
AB103089-1|BAD89432.1| 673|Homo sapiens signal transducer and a... 30 5.2
M59941-1|AAA18171.1| 897|Homo sapiens GM-CSF receptor beta chai... 29 6.9
CR456428-1|CAG30314.1| 903|Homo sapiens CSF2RB protein. 29 6.9
BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril int... 29 6.9
BC070085-1|AAH70085.1| 889|Homo sapiens CSF2RB protein protein. 29 6.9
AY393674-1|AAR02547.1| 156|Homo sapiens immunoglobulin heavy ch... 29 6.9
AL133392-1|CAI23586.1| 897|Homo sapiens colony stimulating fact... 29 6.9
AL008637-2|CAI17999.1| 897|Homo sapiens colony stimulating fact... 29 6.9
AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril int... 29 6.9
AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein. 29 6.9
AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein. 29 6.9
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 29 6.9
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 29 9.1
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 29 9.1
BC054000-1|AAH54000.1| 693|Homo sapiens IRAK1 protein protein. 29 9.1
BC039821-1|AAH39821.1| 478|Homo sapiens disrupted in renal carc... 29 9.1
BC038232-1|AAH38232.1| 826|Homo sapiens Unknown (protein for IM... 29 9.1
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 29 9.1
AK075158-1|BAC11440.1| 411|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK027690-1|BAB55300.1| 478|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK024793-1|BAB15006.1| 329|Homo sapiens protein ( Homo sapiens ... 29 9.1
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 29 9.1
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 29 9.1
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 29 9.1
AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein. 29 9.1
AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein. 29 9.1
>AK090457-1|BAC03438.1| 855|Homo sapiens FLJ00378 protein protein.
Length = 855
Score = 35.1 bits (77), Expect = 0.14
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -2
Query: 399 IHLHLRVLSLLRNGPGAAQVGLGPREPRVSC--PPPTLLHP 283
+ + ++L + G A VG GPR PR+ PPPTLLHP
Sbjct: 805 LKFYQKLLQKEKRNKGKAPVGTGPR-PRLQAARPPPTLLHP 844
>BC060777-1|AAH60777.1| 129|Homo sapiens C1orf96 protein protein.
Length = 129
Score = 34.3 bits (75), Expect = 0.24
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Frame = +2
Query: 161 PSSHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDR------KP-VWEGWRSVGGGQDTR 319
P S + S QEP + P + RLG R P +W+ W G +D+
Sbjct: 3 PGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSEDSA 62
Query: 320 -----GSRGPSPTCAAPGP 361
G+ GP+P CA P P
Sbjct: 63 SSESSGAGGPAPRCAPPSP 81
>BC039241-1|AAH39241.1| 140|Homo sapiens C1orf96 protein protein.
Length = 140
Score = 34.3 bits (75), Expect = 0.24
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Frame = +2
Query: 161 PSSHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDR------KP-VWEGWRSVGGGQDTR 319
P S + S QEP + P + RLG R P +W+ W G +D+
Sbjct: 3 PGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSEDSA 62
Query: 320 -----GSRGPSPTCAAPGP 361
G+ GP+P CA P P
Sbjct: 63 SSESSGAGGPAPRCAPPSP 81
>BC033513-1|AAH33513.1| 265|Homo sapiens Unknown (protein for
IMAGE:5172161) protein.
Length = 265
Score = 34.3 bits (75), Expect = 0.24
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Frame = +2
Query: 71 GSDSLVDGDRWPHRLTQAQPPHRYTGTESG-PSSHIFSHKGGLLQEPSGDAQFPAFEPPW 247
GS SL D R L + + P + G P+ + H+ G + SGD Q P PP
Sbjct: 77 GSCSLTDSQRDEGHLDEERQPAQQVHEPHGAPTRPLPGHRDGPARFGSGDTQPPPPPPPP 136
Query: 248 QRRLGD-----RKPVWEGWRSVGGGQ--DTRGSRGPSPTCAAP 355
+ R D R+ E S GGQ + R PT AAP
Sbjct: 137 RPRPADDRTTVRRRREEPGPSAAGGQARASAARRRGGPTAAAP 179
>BC015419-1|AAH15419.1| 270|Homo sapiens chromosome 1 open reading
frame 96 protein.
Length = 270
Score = 34.3 bits (75), Expect = 0.24
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Frame = +2
Query: 161 PSSHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDR------KP-VWEGWRSVGGGQDTR 319
P S + S QEP + P + RLG R P +W+ W G +D+
Sbjct: 3 PGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSEDSA 62
Query: 320 -----GSRGPSPTCAAPGP 361
G+ GP+P CA P P
Sbjct: 63 SSESSGAGGPAPRCAPPSP 81
>AL117350-3|CAI22869.1| 270|Homo sapiens chromosome 1 open reading
frame 96 protein.
Length = 270
Score = 34.3 bits (75), Expect = 0.24
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Frame = +2
Query: 161 PSSHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDR------KP-VWEGWRSVGGGQDTR 319
P S + S QEP + P + RLG R P +W+ W G +D+
Sbjct: 3 PGSGVKSEYMKRYQEPRWEEYGPCYRELLHYRLGRRLLEQAHAPWLWDDWGPAGSSEDSA 62
Query: 320 -----GSRGPSPTCAAPGP 361
G+ GP+P CA P P
Sbjct: 63 SSESSGAGGPAPRCAPPSP 81
>CR381696-3|CAI95411.1| 266|Homo sapiens dehydrogenase/reductase
(SDR family) X-linked protein.
Length = 266
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -2
Query: 357 PGAAQVGLGPREPRVSCPPPTLLHPSH----TGLRSPRRRCQGGSKA 229
P ++VGL P PR + PP TL P H G +PR R Q A
Sbjct: 37 PRLSRVGLQPSSPRAAAPPRTLTPPGHGRGPGGSHAPRPRHQAALPA 83
>BX649443-3|CAI95432.1| 266|Homo sapiens dehydrogenase/reductase
(SDR family) X-linked protein.
Length = 266
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -2
Query: 357 PGAAQVGLGPREPRVSCPPPTLLHPSH----TGLRSPRRRCQGGSKA 229
P ++VGL P PR + PP TL P H G +PR R Q A
Sbjct: 37 PRLSRVGLQPSSPRAAAPPRTLTPPGHGRGPGGSHAPRPRHQAALPA 83
>BC071609-1|AAH71609.1| 270|Homo sapiens chromosome 1 open reading
frame 96 protein.
Length = 270
Score = 33.5 bits (73), Expect = 0.42
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Frame = +2
Query: 161 PSSHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDR------KP-VWEGWRSVGGGQDTR 319
P S + S QEP + P + RLG R P +W+ W G +D+
Sbjct: 3 PGSGVKSEYMKRYQEPRWEEYGPCYGELLHYRLGRRLLEQAHAPWLWDDWGPAGSSEDSA 62
Query: 320 -----GSRGPSPTCAAPGP 361
G+ GP+P CA P P
Sbjct: 63 SSESSGAGGPAPRCAPPSP 81
>BC013906-1|AAH13906.1| 316|Homo sapiens FLJ36031 protein protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.98
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +2
Query: 116 TQAQPPHRYTGTESGPSSHIFS-HKGGLLQEPSGDAQFPAFEPPWQRRLGDRKPVWEGWR 292
T A P G GP + + H GG L+ DA P QRR+G +P +
Sbjct: 137 TAAAPRGELPGQARGPRALLRGPHLGGDLEGGHPDADHLPHHPRRQRRVGRAQPGGSAAQ 196
Query: 293 SVGGGQDTRGSRGPSPTC-AAPG 358
G G+ G +P APG
Sbjct: 197 GAPGPASEPGTHGEAPPLPGAPG 219
>AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.
Length = 1651
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
Frame = +2
Query: 101 WPHRLTQAQPPHRYTGTESGPSSHIFSHKG---------GLLQEPSGDAQFPAFE 238
WPHR +PP +G PS HKG +L E S D++ PA E
Sbjct: 1059 WPHRRDSGRPPGDSSGQAVAPSEGANKHKGWSRQGLRRPSILPEGSSDSRGPAVE 1113
>AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protein
protein.
Length = 369
Score = 31.9 bits (69), Expect = 1.3
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 206 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 264
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ AF+ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 265 QYYPDGNSQYGQQQDAFQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 319
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F + G P G R G RG RGP PGP
Sbjct: 879 QGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F + G P G R G RG RGP PGP
Sbjct: 879 QGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F + G P G R G RG RGP PGP
Sbjct: 879 QGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F + G P G R G RG RGP PGP
Sbjct: 879 QGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F + G P G R G RG RGP PGP
Sbjct: 879 QGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F + G P G R G RG RGP PGP
Sbjct: 833 QGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 886
>AK022417-1|BAB14032.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ12355 fis, clone MAMMA1002333. ).
Length = 156
Score = 31.1 bits (67), Expect = 2.3
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 360 GPGAAQVGLGPREPRVSCPPPTLLHPSHTGLRSPRRR-CQG 241
GPG G PR P+ PPP P H+G R R R C G
Sbjct: 99 GPGFRGGGRSPRGPKPPLPPP----PPHSGGRQRRERGCPG 135
>AB029488-1|BAA89482.1| 132|Homo sapiens C11orf21 protein.
Length = 132
Score = 31.1 bits (67), Expect = 2.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 98 RWPHRLTQA--QPPHRYTGTESGPS 166
RWPH +Q+ +PP R+TGT PS
Sbjct: 22 RWPHLSSQSGVEPPDRWTGTPGWPS 46
>X79201-1|CAA55792.1| 391|Homo sapiens SYT protein.
Length = 391
Score = 30.7 bits (66), Expect = 3.0
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 234 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 292
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ A++ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 293 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 347
>CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 30.7 bits (66), Expect = 3.0
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 234 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 292
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ A++ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 293 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 347
>CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 30.7 bits (66), Expect = 3.0
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 234 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 292
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ A++ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 293 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 347
>BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 30.7 bits (66), Expect = 3.0
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 230 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 288
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ A++ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 289 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 343
>BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 30.7 bits (66), Expect = 3.0
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 230 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 288
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ A++ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 289 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 343
>AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 457
Score = 30.7 bits (66), Expect = 3.0
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 230 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 288
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ A++ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 289 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 343
>AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 457
Score = 30.7 bits (66), Expect = 3.0
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 38 PPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYTGTESGPSSHIFSHKG-----GLLQ 202
PPM ++ G+ + P+R Q PP +Y+G E +SH G G+ Q
Sbjct: 230 PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQ-YSHGGQGPPEGMNQ 288
Query: 203 E--PSGDAQF----PAFE-PPWQRRLGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
+ P G++Q+ A++ PP Q+ ++ + G + G Q +G P+ PGP
Sbjct: 289 QYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQ-----QGYGPSQGGPGP 343
>BC036690-1|AAH36690.1| 687|Homo sapiens LMTK3 protein protein.
Length = 687
Score = 30.3 bits (65), Expect = 3.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 263 DRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGPFRSSDK 379
+R P WR+ G + T S GP+PT P P S ++
Sbjct: 243 ERPPETGPWRAPGPWEKTPESWGPAPTIGEPAPETSLER 281
>BC025767-1|AAH25767.1| 670|Homo sapiens rhophilin, Rho GTPase
binding protein 1 protein.
Length = 670
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 257 LGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
LGDR+PV G R + Q G + P+ T A+P P
Sbjct: 599 LGDRRPVLLGPRGLLRSQREHGCKTPASTWASPRP 633
>AY082588-1|AAL89809.1| 695|Homo sapiens rhophilin-1 protein.
Length = 695
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 257 LGDRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
LGDR+PV G R + Q G + P+ T A+P P
Sbjct: 624 LGDRRPVLLGPRGLLRSQREHGCKTPASTWASPRP 658
>AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin
receptor-interacting protein splice variant b protein.
Length = 1548
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -2
Query: 384 RVLSLLRNGPGAAQVGLGPREPRVSCPPPTLLHPSHTGLRSPRRRCQGGS 235
R L G GA Q P PR PPPT H S P R G S
Sbjct: 749 RALKESSEGGGAPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGAS 798
>AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor
interacting protein splice variant a protein.
Length = 2161
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -2
Query: 384 RVLSLLRNGPGAAQVGLGPREPRVSCPPPTLLHPSHTGLRSPRRRCQGGS 235
R L G GA Q P PR PPPT H S P R G S
Sbjct: 1362 RALKESSEGGGAPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGAS 1411
>AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein.
Length = 1480
Score = 30.3 bits (65), Expect = 3.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 263 DRKPVWEGWRSVGGGQDTRGSRGPSPTCAAPGPFRSSDK 379
+R P WR+ G + T S GP+PT P P S ++
Sbjct: 1036 ERPPETGPWRAPGPWEKTPESWGPAPTIGEPAPETSLER 1074
>U16031-1|AAA57193.1| 847|Homo sapiens IL-4 Stat protein.
Length = 847
Score = 29.9 bits (64), Expect = 5.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 14 VPTTTRHAPPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYT 145
+PT P M S DL + DS + P + Q PPH ++
Sbjct: 656 LPTPELQMPTMVPSYDLGMAPDSSMSMQLGPDMVPQVYPPHSHS 699
>BC075852-1|AAH75852.1| 847|Homo sapiens signal transducer and
activator of transcription 6, interleukin-4 induced
protein.
Length = 847
Score = 29.9 bits (64), Expect = 5.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 14 VPTTTRHAPPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYT 145
+PT P M S DL + DS + P + Q PPH ++
Sbjct: 656 LPTPELQMPTMVPSYDLGMAPDSSMSMQLGPDMVPQVYPPHSHS 699
>AY615283-1|AAU04439.1| 404|Homo sapiens STAT6B protein.
Length = 404
Score = 29.9 bits (64), Expect = 5.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 14 VPTTTRHAPPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYT 145
+PT P M S DL + DS + P + Q PPH ++
Sbjct: 213 LPTPELQMPTMVPSYDLGMAPDSSMSMQLGPDMVPQVYPPHSHS 256
>AK128263-1|BAC87359.1| 198|Homo sapiens protein ( Homo sapiens
cDNA FLJ46399 fis, clone THYMU3004632. ).
Length = 198
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 245 WQRRLGDR--KPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
W +R+ R +P W W S+G G D+ GS P +P P
Sbjct: 83 WSQRIQGRVQQPHWGRWVSLGLGNDSIGSLSMWPGVRSPQP 123
>AF417842-1|AAL06595.1| 847|Homo sapiens signal transducer and
activator of transcription 6, interleukin-4 induced
protein.
Length = 847
Score = 29.9 bits (64), Expect = 5.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 14 VPTTTRHAPPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYT 145
+PT P M S DL + DS + P + Q PPH ++
Sbjct: 656 LPTPELQMPTMVPSYDLGMAPDSSMSMQLGPDMVPQVYPPHSHS 699
>AF067575-1|AAC67525.1| 847|Homo sapiens signal transducer and
activator of transcription 6 protein.
Length = 847
Score = 29.9 bits (64), Expect = 5.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 14 VPTTTRHAPPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYT 145
+PT P M S DL + DS + P + Q PPH ++
Sbjct: 656 LPTPELQMPTMVPSYDLGMAPDSSMSMQLGPDMVPQVYPPHSHS 699
>AB103089-1|BAD89432.1| 673|Homo sapiens signal transducer and
activator of transcription 6 nirs variant 2 protein.
Length = 673
Score = 29.9 bits (64), Expect = 5.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 14 VPTTTRHAPPMQDSMDLSVGSDSLVDGDRWPHRLTQAQPPHRYT 145
+PT P M S DL + DS + P + Q PPH ++
Sbjct: 482 LPTPELQMPTMVPSYDLGMAPDSSMSMQLGPDMVPQVYPPHSHS 525
>M59941-1|AAA18171.1| 897|Homo sapiens GM-CSF receptor beta chain
protein.
Length = 897
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 SHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGG 307
SH+F + L P + F + PP Q G R P EG VG G
Sbjct: 484 SHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFG 530
>CR456428-1|CAG30314.1| 903|Homo sapiens CSF2RB protein.
Length = 903
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 SHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGG 307
SH+F + L P + F + PP Q G R P EG VG G
Sbjct: 490 SHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFG 536
>BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril
interfacer 1 protein.
Length = 1016
Score = 29.5 bits (63), Expect = 6.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 299 GGGQDTRGSRGPSPTCAAPGP 361
GG + GSR P+P A PGP
Sbjct: 266 GGSSSSGGSRAPAPASAPPGP 286
>BC070085-1|AAH70085.1| 889|Homo sapiens CSF2RB protein protein.
Length = 889
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 SHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGG 307
SH+F + L P + F + PP Q G R P EG VG G
Sbjct: 484 SHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFG 530
>AY393674-1|AAR02547.1| 156|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 156
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 224 FPAFEPPWQRRLGDRKPVWEGWRSVGGGQDT 316
F ++ W R+ ++P W GW + G G T
Sbjct: 25 FSSYAMHWLRQASGQRPEWMGWINSGNGHTT 55
>AL133392-1|CAI23586.1| 897|Homo sapiens colony stimulating factor
2 receptor, beta, low-affinity (granulocyte-macrophag
protein.
Length = 897
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 SHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGG 307
SH+F + L P + F + PP Q G R P EG VG G
Sbjct: 484 SHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFG 530
>AL008637-2|CAI17999.1| 897|Homo sapiens colony stimulating factor
2 receptor, beta, low-affinity (granulocyte-macrophag
protein.
Length = 897
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 SHIFSHKGGLLQEPSGDAQFPAFEPPWQRRLGDRKPVWEGWRSVGGG 307
SH+F + L P + F + PP Q G R P EG VG G
Sbjct: 484 SHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFG 530
>AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril
interfase located protein protein.
Length = 1016
Score = 29.5 bits (63), Expect = 6.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 299 GGGQDTRGSRGPSPTCAAPGP 361
GG + GSR P+P A PGP
Sbjct: 266 GGSSSSGGSRAPAPASAPPGP 286
>AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein.
Length = 1016
Score = 29.5 bits (63), Expect = 6.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 299 GGGQDTRGSRGPSPTCAAPGP 361
GG + GSR P+P A PGP
Sbjct: 266 GGSSSSGGSRAPAPASAPPGP 286
>AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein.
Length = 1016
Score = 29.5 bits (63), Expect = 6.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 299 GGGQDTRGSRGPSPTCAAPGP 361
GG + GSR P+P A PGP
Sbjct: 266 GGSSSSGGSRAPAPASAPPGP 286
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -1
Query: 310 LPPTHA-PPSLPHRLAIPKASLP 245
LPPTHA PP P L +P AS P
Sbjct: 354 LPPTHAVPPHPPPGLGLPPASYP 376
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 29.1 bits (62), Expect = 9.1
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDR----KPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F P G R KP G R G + +RG+RGP+ PGP
Sbjct: 849 QGPKGSTGFPGF-PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPT---GKPGP 902
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 29.1 bits (62), Expect = 9.1
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDR----KPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F P G R KP G R G + +RG+RGP+ PGP
Sbjct: 733 QGPKGSTGFPGF-PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPT---GKPGP 786
>BC054000-1|AAH54000.1| 693|Homo sapiens IRAK1 protein protein.
Length = 693
Score = 29.1 bits (62), Expect = 9.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 284 GWRSVGGGQDTRGSRGPSPTCAAP 355
GWR GG++ RG P+P P
Sbjct: 47 GWRRAAGGREARGLLAPTPDAPRP 70
>BC039821-1|AAH39821.1| 478|Homo sapiens disrupted in renal
carcinoma 2 protein.
Length = 478
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 96 SPSTRLSLPTLRSMLSCIGGACRVVVGTVVM 4
S R + + SMLS +GGAC +VG +V+
Sbjct: 175 SADERATATAIASMLSYLGGACAFLVGPLVV 205
>BC038232-1|AAH38232.1| 826|Homo sapiens Unknown (protein for
IMAGE:5741123) protein.
Length = 826
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 107 HRLTQAQPPHRYTGTESGPSSHIFSHKGGLLQEPSGDAQFPA 232
HR Q+ PP +G E S+ IF H + + P + P+
Sbjct: 319 HRAPQSGPPLPSSGNEQHSSASIFEHVDRISRPPEASRRVPS 360
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 29.1 bits (62), Expect = 9.1
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDR----KPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F P G R KP G R G + +RG+RGP+ PGP
Sbjct: 849 QGPKGSTGFPGF-PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPT---GKPGP 902
>AK075158-1|BAC11440.1| 411|Homo sapiens protein ( Homo sapiens
cDNA FLJ90677 fis, clone PLACE1005725. ).
Length = 411
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 96 SPSTRLSLPTLRSMLSCIGGACRVVVGTVVM 4
S R + + SMLS +GGAC +VG +V+
Sbjct: 175 SADERATATAIASMLSYLGGACAFLVGPLVV 205
>AK027690-1|BAB55300.1| 478|Homo sapiens protein ( Homo sapiens
cDNA FLJ14784 fis, clone NT2RP4000713. ).
Length = 478
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 96 SPSTRLSLPTLRSMLSCIGGACRVVVGTVVM 4
S R + + SMLS +GGAC +VG +V+
Sbjct: 175 SADERATATAIASMLSYLGGACAFLVGPLVV 205
>AK024793-1|BAB15006.1| 329|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21140 fis, clone CAS07548. ).
Length = 329
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/61 (34%), Positives = 23/61 (37%)
Frame = -2
Query: 471 RSVAESLLLTRVHYRHLGHCLSRHIHLHLRVLSLLRNGPGAAQVGLGPREPRVSCPPPTL 292
R V LL HL H L L L L+ PG G GP EP + PT
Sbjct: 74 RQVCLLLLQLCSGLEHLKPYHVTHCDLRLENLLLVHYQPGGTAQGFGPAEPSPTSSYPTR 133
Query: 291 L 289
L
Sbjct: 134 L 134
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 29.1 bits (62), Expect = 9.1
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDR----KPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F P G R KP G R G + +RG+RGP+ PGP
Sbjct: 810 QGPKGSTGFPGF-PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPT---GKPGP 863
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 29.1 bits (62), Expect = 9.1
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDR----KPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F P G R KP G R G + +RG+RGP+ PGP
Sbjct: 861 QGPKGSTGFPGF-PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPT---GKPGP 914
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 29.1 bits (62), Expect = 9.1
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 200 QEPSGDAQFPAFEPPWQRRLGDR----KPVWEGWRSVGGGQDTRGSRGPSPTCAAPGP 361
Q P G FP F P G R KP G R G + +RG+RGP+ PGP
Sbjct: 849 QGPKGSTGFPGF-PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPT---GKPGP 902
>AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein.
Length = 764
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/61 (34%), Positives = 23/61 (37%)
Frame = -2
Query: 471 RSVAESLLLTRVHYRHLGHCLSRHIHLHLRVLSLLRNGPGAAQVGLGPREPRVSCPPPTL 292
R V LL HL H L L L L+ PG G GP EP + PT
Sbjct: 509 RQVCLLLLQLCSGLEHLKPYHVTHCDLRLENLLLVHYQPGGTAQGFGPAEPSPTSSYPTR 568
Query: 291 L 289
L
Sbjct: 569 L 569
>AB046769-1|BAB13375.2| 1865|Homo sapiens KIAA1549 protein protein.
Length = 1865
Score = 29.1 bits (62), Expect = 9.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 107 HRLTQAQPPHRYTGTESGPSSHIFSHKGGLLQEPSGDAQFPA 232
HR Q+ PP +G E S+ IF H + + P + P+
Sbjct: 1374 HRAPQSGPPLPSSGNEQHSSASIFEHVDRISRPPEASRRVPS 1415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,981,031
Number of Sequences: 237096
Number of extensions: 2028395
Number of successful extensions: 9577
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 8109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9561
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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