Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1171
         (498 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve...    37   0.29 
UniRef50_A1G5N1 Cluster: Glycosyl transferase, family 51 precurs...    34   2.0  
UniRef50_Q5U198 Cluster: RE52333p; n=8; Endopterygota|Rep: RE523...    34   2.0  
UniRef50_A3Z1B3 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_Q0FRD5 Cluster: Putative uncharacterized protein; n=1; ...    32   6.2  
UniRef50_UPI00003838CE Cluster: hypothetical protein Magn0300638...    32   8.2  
UniRef50_A1W733 Cluster: Putative uncharacterized protein; n=2; ...    32   8.2  
UniRef50_A0L9X4 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 746

 Score = 36.7 bits (81), Expect = 0.29
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +2

Query: 35  IVILLSTRGTAVSDIWFMHSAER 103
           +VILLSTRGTA SD W +H AE+
Sbjct: 660 VVILLSTRGTADSDNWHLHLAEK 682


>UniRef50_A1G5N1 Cluster: Glycosyl transferase, family 51 precursor;
           n=2; Salinispora|Rep: Glycosyl transferase, family 51
           precursor - Salinispora arenicola CNS205
          Length = 808

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 24/87 (27%), Positives = 42/87 (48%)
 Frame = -3

Query: 457 VSTDSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDFGAVMHVLRKKPIASISAIQMG 278
           ++  + H A + + T   E  ++    E R+  ++  +F     +LR   IAS      G
Sbjct: 148 IAYSATHPADVVAAT---EDTNARKLREMRYAVQIENEFSKDEILLRYLNIASFGNGAYG 204

Query: 277 FYVASRVLMRNATSKVTLFRASRLSGL 197
            Y AS+V    + SK+T+  A+ L+GL
Sbjct: 205 IYAASQVYFAKSPSKLTISEAALLAGL 231


>UniRef50_Q5U198 Cluster: RE52333p; n=8; Endopterygota|Rep: RE52333p
           - Drosophila melanogaster (Fruit fly)
          Length = 323

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 216 PPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHHXRSAECMNQMSETAVPLVLS--- 46
           P DS   T S S  DSA +   +    H PA    H   SA C+  +S T+VP VL+   
Sbjct: 219 PADSGNYTCSPSSSDSASVVVHVINGEH-PA-AMQHGNSSATCLRPLSSTSVPFVLATWM 276

Query: 45  SITIATTS 22
           S+T+A+ +
Sbjct: 277 SMTVASVA 284


>UniRef50_A3Z1B3 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. WH 5701|Rep: Putative uncharacterized
           protein - Synechococcus sp. WH 5701
          Length = 165

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = -1

Query: 177 PDSARLASALEAFRHNPADGSSHHXRSAECMNQMSETAVPLVL 49
           PD    A  LEAFRH   +G S     A C  +  E A  L L
Sbjct: 63  PDCTAAAPELEAFRHCCREGLSQEAAEAHCWREFGEEACRLAL 105


>UniRef50_Q0FRD5 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
           protein - Roseovarius sp. HTCC2601
          Length = 676

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -3

Query: 469 AQG*VSTDSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDFGA 335
           +Q  V T+S  DAALP  T   ER    D    R R  +  DF A
Sbjct: 15  SQAQVETESAQDAALPFGTLSAERPEDLDQPRERFRIAILGDFSA 59


>UniRef50_UPI00003838CE Cluster: hypothetical protein Magn03006381;
           n=1; Magnetospirillum magnetotacticum MS-1|Rep:
           hypothetical protein Magn03006381 - Magnetospirillum
           magnetotacticum MS-1
          Length = 201

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +1

Query: 73  GHLVHALGRAAVVRTTIRGIMPERL*GRSQPSRIRQGYAHCGAPRVGRL 219
           G ++HA G AA +R  I G+    L G   P ++R+     G PR+ RL
Sbjct: 48  GRVLHAAGGAATLRAGIAGVDGTILPGLRLPDQVRRAGMLDGRPRMIRL 96


>UniRef50_A1W733 Cluster: Putative uncharacterized protein; n=2;
           Proteobacteria|Rep: Putative uncharacterized protein -
           Acidovorax sp. (strain JS42)
          Length = 280

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 458 SLNRFAARRCSTEHNTPPGTEVVYRLFRAPT 366
           +L  F  + C   H TP G   ++RLF +PT
Sbjct: 140 ALEHFGWKECEEAHQTPQGKGFLWRLFNSPT 170


>UniRef50_A0L9X4 Cluster: Putative uncharacterized protein; n=1;
           Magnetococcus sp. MC-1|Rep: Putative uncharacterized
           protein - Magnetococcus sp. (strain MC-1)
          Length = 1250

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 454 STDSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDFGAVMHVLRKKPIASISAIQ 284
           S  S  D   P T+ RQERK +     P H T+   DF   ++ L +K   SI  I+
Sbjct: 428 SAHSSVDQGQPWTSSRQERKQALAQQRPEHLTQ---DFEPSVNALVRKSAMSIEQIK 481


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,116,617
Number of Sequences: 1657284
Number of extensions: 10882133
Number of successful extensions: 28586
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28577
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)