Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1171
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   2.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   5.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 256 KRETRRRSPFGSRRSMLSVFFLTRASRLRSPDIT 357
           +R+T+  SP GS  + ++   L+R S   SP+++
Sbjct: 179 RRKTKPNSPLGSLLAAVTSPVLSRISSASSPNLS 212


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 367 VGARNSL*TTSVPGGVLCSVEQRRAANLLRLSPAPG 474
           VGA  S+ TTS+       V+  R   +LRLS   G
Sbjct: 674 VGAPRSMHTTSLSAAAGIGVDDLRRLCILRLSFVKG 709


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,997
Number of Sequences: 2352
Number of extensions: 11050
Number of successful extensions: 39
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)