Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1171
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 3.9
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 3.9
BC034604-1|AAH34604.1| 753|Homo sapiens striatin, calmodulin bi... 30 5.1
BC004910-1|AAH04910.2| 349|Homo sapiens STRN4 protein protein. 30 5.1
AF212940-1|AAF29527.1| 753|Homo sapiens zinedin protein. 30 5.1
AB209003-1|BAD92240.1| 755|Homo sapiens Zinedin variant protein. 30 5.1
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 6.8
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 6.8
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 6.8
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 6.8
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 141 TPLRPKPA*PNPARICSLWSPESRE 215
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 3.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 141 TPLRPKPA*PNPARICSLWSPESRE 215
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>BC034604-1|AAH34604.1| 753|Homo sapiens striatin, calmodulin
binding protein 4 protein.
Length = 753
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 170 ESGKDMLTVEPRESGGSKQCDFTSRVSH*NARRDVEAHLDRGDR 301
E G +LT+E R S G Q + VSH N + AH DRG R
Sbjct: 621 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 662
>BC004910-1|AAH04910.2| 349|Homo sapiens STRN4 protein protein.
Length = 349
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 170 ESGKDMLTVEPRESGGSKQCDFTSRVSH*NARRDVEAHLDRGDR 301
E G +LT+E R S G Q + VSH N + AH DRG R
Sbjct: 217 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 258
>AF212940-1|AAF29527.1| 753|Homo sapiens zinedin protein.
Length = 753
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 170 ESGKDMLTVEPRESGGSKQCDFTSRVSH*NARRDVEAHLDRGDR 301
E G +LT+E R S G Q + VSH N + AH DRG R
Sbjct: 621 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 662
>AB209003-1|BAD92240.1| 755|Homo sapiens Zinedin variant protein.
Length = 755
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 170 ESGKDMLTVEPRESGGSKQCDFTSRVSH*NARRDVEAHLDRGDR 301
E G +LT+E R S G Q + VSH N + AH DRG R
Sbjct: 623 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 664
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 119 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 226
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 119 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 226
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 119 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 226
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 119 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 226
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,841,922
Number of Sequences: 237096
Number of extensions: 1687794
Number of successful extensions: 3580
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3580
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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