Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1171
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015994-1|AAV36879.1|  323|Drosophila melanogaster RE52333p pro...    34   0.12 
AE014297-1311|AAX52946.1|  296|Drosophila melanogaster CG33512-P...    34   0.12 
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   2.0  

>BT015994-1|AAV36879.1|  323|Drosophila melanogaster RE52333p
           protein.
          Length = 323

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 216 PPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHHXRSAECMNQMSETAVPLVLS--- 46
           P DS   T S S  DSA +   +    H PA    H   SA C+  +S T+VP VL+   
Sbjct: 219 PADSGNYTCSPSSSDSASVVVHVINGEH-PA-AMQHGNSSATCLRPLSSTSVPFVLATWM 276

Query: 45  SITIATTS 22
           S+T+A+ +
Sbjct: 277 SMTVASVA 284


>AE014297-1311|AAX52946.1|  296|Drosophila melanogaster CG33512-PA
           protein.
          Length = 296

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 216 PPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHHXRSAECMNQMSETAVPLVLS--- 46
           P DS   T S S  DSA +   +    H PA    H   SA C+  +S T+VP VL+   
Sbjct: 192 PADSGNYTCSPSSSDSASVVVHVINGEH-PA-AMQHGNSSATCLRPLSSTSVPFVLATWM 249

Query: 45  SITIATTS 22
           S+T+A+ +
Sbjct: 250 SMTVASVA 257


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 102 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 10
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,820,341
Number of Sequences: 53049
Number of extensions: 511469
Number of successful extensions: 1245
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)