Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1170X
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004411-1|AAH04411.1| 224|Homo sapiens KIAA1166 protein. 70 4e-12
AL355606-2|CAI41369.1| 201|Homo sapiens KIAA1166 protein. 70 4e-12
AL355606-1|CAI41368.1| 224|Homo sapiens KIAA1166 protein. 70 4e-12
AK222708-1|BAD96428.1| 224|Homo sapiens KIAA1166 variant protein. 70 4e-12
AK022918-1|BAB14308.1| 224|Homo sapiens protein ( Homo sapiens ... 70 4e-12
AK022807-1|BAB14252.1| 201|Homo sapiens protein ( Homo sapiens ... 70 4e-12
AF270491-1|AAF75787.1| 224|Homo sapiens hepatocellular carcinom... 70 4e-12
Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for ... 32 0.96
X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for ... 32 0.96
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 32 0.96
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 32 0.96
BC142626-1|AAI42627.1| 519|Homo sapiens COL4A1 protein protein. 32 0.96
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 32 0.96
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 32 0.96
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 32 0.96
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 32 0.96
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 32 1.3
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 32 1.3
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 32 1.3
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 31 2.2
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 31 2.2
BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein. 31 2.2
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 31 2.2
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 31 2.2
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 31 2.2
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 31 2.2
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 31 2.2
AF183411-1|AAG09680.1| 247|Homo sapiens cd003 protein protein. 31 2.2
AB209686-1|BAD92923.1| 867|Homo sapiens collagen, type XXIV, al... 31 2.2
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 2.9
M24766-1|AAA52043.1| 673|Homo sapiens alpha-2 type IV collagen ... 31 2.9
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 2.9
BC080644-1|AAH80644.1| 362|Homo sapiens COL4A2 protein protein. 31 2.9
BC020957-1|AAH20957.1| 642|Homo sapiens C17orf71 protein protein. 31 2.9
AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha ... 31 2.9
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 2.9
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 2.9
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 2.9
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 31 2.9
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 31 2.9
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 31 2.9
AK026858-1|BAB15576.1| 991|Homo sapiens protein ( Homo sapiens ... 31 2.9
AK001449-1|BAA91699.1| 642|Homo sapiens protein ( Homo sapiens ... 31 2.9
AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast can... 31 2.9
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 2.9
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 30 3.9
X05610-1|CAA29098.1| 459|Homo sapiens alpha (2) chain protein. 30 3.9
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 30 3.9
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 30 3.9
BC040438-1|AAH40438.1| 333|Homo sapiens C1q and tumor necrosis ... 30 5.1
AY358145-1|AAQ88512.1| 333|Homo sapiens RIWW6503 protein. 30 5.1
AL445985-3|CAM20042.1| 333|Homo sapiens novel protein containin... 30 5.1
AL359736-5|CAH72293.1| 333|Homo sapiens C1q and tumor necrosis ... 30 5.1
AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin receptor-i... 30 5.1
AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor i... 30 5.1
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 29 6.8
X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for ... 29 6.8
S75462-1|AAB20836.1| 345|Homo sapiens collagen type VI alpha 2(... 29 6.8
M10956-1|AAA52007.1| 225|Homo sapiens COL5A2 protein. 29 6.8
J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein. 29 6.8
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 29 6.8
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 29 6.8
BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein. 29 6.8
BC065509-1|AAH65509.1| 1019|Homo sapiens collagen, type VI, alph... 29 6.8
BC043613-1|AAH43613.1| 503|Homo sapiens COL5A2 protein protein. 29 6.8
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 29 6.8
AY029208-1|AAA52056.2| 1019|Homo sapiens type VI collagen alpha ... 29 6.8
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 29 6.8
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 29 6.8
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 29 6.8
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 29 6.8
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 29 6.8
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 29 6.8
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 29 6.8
AC133106-1|AAY24185.1| 503|Homo sapiens unknown protein. 29 6.8
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 29 6.8
AB058773-1|BAB47499.1| 832|Homo sapiens KIAA1870 protein protein. 29 6.8
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 29 9.0
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 29 9.0
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 29 9.0
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 29 9.0
M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein. 29 9.0
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 29 9.0
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 29 9.0
AL133481-1|CAH72723.1| 228|Homo sapiens chromosome 10 open read... 29 9.0
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 29 9.0
>BC004411-1|AAH04411.1| 224|Homo sapiens KIAA1166 protein.
Length = 224
Score = 70.1 bits (164), Expect = 4e-12
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 40 TVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
T + RQQPPPMK+CLSCHQQIHRNAPICPLC
Sbjct: 176 TATFRQQPPPMKACLSCHQQIHRNAPICPLC 206
>AL355606-2|CAI41369.1| 201|Homo sapiens KIAA1166 protein.
Length = 201
Score = 70.1 bits (164), Expect = 4e-12
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 40 TVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
T + RQQPPPMK+CLSCHQQIHRNAPICPLC
Sbjct: 153 TATFRQQPPPMKACLSCHQQIHRNAPICPLC 183
>AL355606-1|CAI41368.1| 224|Homo sapiens KIAA1166 protein.
Length = 224
Score = 70.1 bits (164), Expect = 4e-12
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 40 TVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
T + RQQPPPMK+CLSCHQQIHRNAPICPLC
Sbjct: 176 TATFRQQPPPMKACLSCHQQIHRNAPICPLC 206
>AK222708-1|BAD96428.1| 224|Homo sapiens KIAA1166 variant protein.
Length = 224
Score = 70.1 bits (164), Expect = 4e-12
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 40 TVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
T + RQQPPPMK+CLSCHQQIHRNAPICPLC
Sbjct: 176 TATFRQQPPPMKACLSCHQQIHRNAPICPLC 206
>AK022918-1|BAB14308.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ12856 fis, clone NT2RP2003511. ).
Length = 224
Score = 70.1 bits (164), Expect = 4e-12
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 40 TVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
T + RQQPPPMK+CLSCHQQIHRNAPICPLC
Sbjct: 176 TATFRQQPPPMKACLSCHQQIHRNAPICPLC 206
>AK022807-1|BAB14252.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ12745 fis, clone NT2RP2000758. ).
Length = 201
Score = 70.1 bits (164), Expect = 4e-12
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 40 TVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
T + RQQPPPMK+CLSCHQQIHRNAPICPLC
Sbjct: 153 TATFRQQPPPMKACLSCHQQIHRNAPICPLC 183
>AF270491-1|AAF75787.1| 224|Homo sapiens hepatocellular
carcinoma-associated antigen 127 protein.
Length = 224
Score = 70.1 bits (164), Expect = 4e-12
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 40 TVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
T + RQQPPPMK+CLSCHQQIHRNAPICPLC
Sbjct: 176 TATFRQQPPPMKACLSCHQQIHRNAPICPLC 206
>Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for
alpha1 chain of basement membrane (type IV) collagen.in
neoplastic tissue). ).
Length = 1212
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 20 MQGPEGPQGPPGQKGDTGEPGLP 42
>X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for
alpha-1 chain of collagen IV N-terminus. ).
Length = 944
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>BC142626-1|AAI42627.1| 519|Homo sapiens COL4A1 protein protein.
Length = 519
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 32.3 bits (70), Expect = 0.96
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
++GPEGP+G G GDTG+ P
Sbjct: 65 MQGPEGPQGPPGQKGDTGEPGLP 87
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 chain
protein.
Length = 1670
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 208 GTLRGPEGPRGAAGTLGDTGDLAAP 282
G LR P GPRG G G GD AP
Sbjct: 1173 GLLRAPPGPRGNPGAQGAKGDRGAP 1197
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 208 GTLRGPEGPRGAAGTLGDTGDLAAP 282
G LR P GPRG G G GD AP
Sbjct: 1173 GLLRAPPGPRGNPGAQGAKGDRGAP 1197
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 208 GTLRGPEGPRGAAGTLGDTGDLAAP 282
G LR P GPRG G G GD AP
Sbjct: 587 GLLRAPPGPRGNPGAQGAKGDRGAP 611
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 TLRGPEGPRGAAGTLGDTGDLAAP 282
T+ GP GPRG G +GD G+ P
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEP 1221
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 TLRGPEGPRGAAGTLGDTGDLAAP 282
T+ GP GPRG G +GD G+ P
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEP 1221
>BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein.
Length = 854
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
L GPEG RG G G TGD AP
Sbjct: 493 LPGPEGARGPPGFKGHTGDSGAP 515
Score = 29.1 bits (62), Expect = 9.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 196 RIAAGTLRGPEGPRGAAGTLGDTGDLAAP 282
R G L GP GP G G G GD AP
Sbjct: 750 RPGQGGLEGPSGPIGPKGERGAKGDPGAP 778
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 TLRGPEGPRGAAGTLGDTGDLAAP 282
T+ GP GPRG G +GD G+ P
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEP 1221
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 TLRGPEGPRGAAGTLGDTGDLAAP 282
T+ GP GPRG G +GD G+ P
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEP 1221
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 TLRGPEGPRGAAGTLGDTGDLAAP 282
T+ GP GPRG G +GD G+ P
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEP 1221
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 TLRGPEGPRGAAGTLGDTGDLAAP 282
T+ GP GPRG G +GD G+ P
Sbjct: 1198 TVLGPPGPRGEPGPVGDQGERGEP 1221
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
L GPEG RG G G TGD AP
Sbjct: 1265 LPGPEGARGPPGFKGHTGDSGAP 1287
Score = 29.1 bits (62), Expect = 9.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 196 RIAAGTLRGPEGPRGAAGTLGDTGDLAAP 282
R G L GP GP G G G GD AP
Sbjct: 1522 RPGQGGLEGPSGPIGPKGERGAKGDPGAP 1550
>AF183411-1|AAG09680.1| 247|Homo sapiens cd003 protein protein.
Length = 247
Score = 31.1 bits (67), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 61 PPPMKSCLSCHQQIHRNAPICPLC 132
PP +CL+CH + + +PI P C
Sbjct: 6 PPQALTCLTCHCHVEQKSPIIPEC 29
>AB209686-1|BAD92923.1| 867|Homo sapiens collagen, type XXIV, alpha
1 variant protein.
Length = 867
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 211 TLRGPEGPRGAAGTLGDTGDLAAP 282
T+ GP GPRG G +GD G+ P
Sbjct: 372 TVLGPPGPRGEPGPVGDQGERGEP 395
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAP 282
GPEGP+G G GD G L P
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPP 861
>M24766-1|AAA52043.1| 673|Homo sapiens alpha-2 type IV collagen
protein.
Length = 673
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGP-LVSPRGYVPPP 354
RGP+GP+G G G G + AP + V P V P+G PP
Sbjct: 328 RGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPP 374
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAP 282
GPEGP+G G GD G L P
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPP 861
>BC080644-1|AAH80644.1| 362|Homo sapiens COL4A2 protein protein.
Length = 362
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGP-LVSPRGYVPPP 354
RGP+GP+G G G G + AP + V P V P+G PP
Sbjct: 17 RGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPP 63
>BC020957-1|AAH20957.1| 642|Homo sapiens C17orf71 protein protein.
Length = 642
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 307 VKIMFVCNAAPRGPPCPRVYPRRREVPLVP 218
++I+ + P PPCP YP ++E+ L P
Sbjct: 570 LQIILMPQVQPGPPPCPVFYPEKQEITLPP 599
>AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha 6
protein.
Length = 939
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAA 279
L+GP+GPRG AG G+ G + +
Sbjct: 256 LKGPQGPRGEAGVKGEKGGVGS 277
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAP 282
GPEGP+G G GD G L P
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPP 861
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAP 282
GPEGP+G G GD G L P
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPP 861
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAP 282
GPEGP+G G GD G L P
Sbjct: 841 GPEGPKGRGGPNGDPGPLGPP 861
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGP-LVSPRGYVPPP 354
RGP+GP+G G G G + AP + V P V P+G PP
Sbjct: 1367 RGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPP 1413
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGP-LVSPRGYVPPP 354
RGP+GP+G G G G + AP + V P V P+G PP
Sbjct: 1367 RGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPP 1413
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGP-LVSPRGYVPPP 354
RGP+GP+G G G G + AP + V P V P+G PP
Sbjct: 1367 RGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPP 1413
>AK026858-1|BAB15576.1| 991|Homo sapiens protein ( Homo sapiens cDNA:
FLJ23205 fis, clone ADSE00359. ).
Length = 991
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 307 VKIMFVCNAAPRGPPCPRVYPRRREVPLVP 218
++I+ + P PPCP YP ++E+ L P
Sbjct: 919 LQIILMPQVQPGPPPCPVFYPEKQEITLPP 948
>AK001449-1|BAA91699.1| 642|Homo sapiens protein ( Homo sapiens
cDNA FLJ10587 fis, clone NT2RP2004042. ).
Length = 642
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 307 VKIMFVCNAAPRGPPCPRVYPRRREVPLVP 218
++I+ + P PPCP YP ++E+ L P
Sbjct: 570 LQIILMPQVQPGPPPCPVFYPEKQEITLPP 599
>AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast cancer 2
protein.
Length = 1023
Score = 30.7 bits (66), Expect = 2.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 307 VKIMFVCNAAPRGPPCPRVYPRRREVPLVP 218
++I+ + P PPCP YP ++E+ L P
Sbjct: 919 LQIILMPQVQPGPPPCPVFYPEKQEITLPP 948
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAP 282
GPEGP+G G GD G L P
Sbjct: 795 GPEGPKGRGGPNGDPGPLGPP 815
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAP 282
RGP GP+GA G LG G P
Sbjct: 368 RGPPGPQGATGPLGPKGQTGEP 389
>X05610-1|CAA29098.1| 459|Homo sapiens alpha (2) chain protein.
Length = 459
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGP-LVSPRGYVPPP 354
RGP+GP+G G G G + AP + + P V P+G PP
Sbjct: 114 RGPKGPKGDPGFPGAPGTVGAPGIAGIPQKIAIQPGTVGPQGRRGPP 160
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAP 282
RGP GP+GA G LG G P
Sbjct: 437 RGPPGPQGATGPLGPKGQTGEP 458
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAP 282
RGP GP+GA G LG G P
Sbjct: 437 RGPPGPQGATGPLGPKGQTGEP 458
>BC040438-1|AAH40438.1| 333|Homo sapiens C1q and tumor necrosis
factor related protein 9 protein.
Length = 333
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGPRG G LG TG
Sbjct: 134 GPEGPRGNIGPLGPTG 149
>AY358145-1|AAQ88512.1| 333|Homo sapiens RIWW6503 protein.
Length = 333
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGPRG G LG TG
Sbjct: 134 GPEGPRGNIGPLGPTG 149
>AL445985-3|CAM20042.1| 333|Homo sapiens novel protein containing a
Collagen triple helix repeat (20 copies) protein.
Length = 333
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGPRG G LG TG
Sbjct: 134 GPEGPRGNIGPLGPTG 149
>AL359736-5|CAH72293.1| 333|Homo sapiens C1q and tumor necrosis
factor related protein 9 protein.
Length = 333
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGPRG G LG TG
Sbjct: 134 GPEGPRGNIGPLGPTG 149
>AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin
receptor-interacting protein splice variant b protein.
Length = 1548
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -1
Query: 331 DSQEVLPLVKIMFVCNAAPRGPPCPRVYPRRREVPLVPAVSPRRSAVCSRT 179
+ E LPL + F+ N PR P P + P VP SPRRS S T
Sbjct: 870 EEPERLPL-HVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPT 919
>AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor
interacting protein splice variant a protein.
Length = 2161
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -1
Query: 331 DSQEVLPLVKIMFVCNAAPRGPPCPRVYPRRREVPLVPAVSPRRSAVCSRT 179
+ E LPL + F+ N PR P P + P VP SPRRS S T
Sbjct: 1483 EEPERLPL-HVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPT 1532
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAP 282
RGPEGP+G G G G + +P
Sbjct: 395 RGPEGPQGQRGETGPPGPVGSP 416
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 1117 LPGPQGPRGDKGDHGDRGD 1135
>X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for
pro-alpha 2 (V) collagen chain. ).
Length = 1099
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 720 LPGPQGPRGDKGDHGDRGD 738
>S75462-1|AAB20836.1| 345|Homo sapiens collagen type VI alpha 2(VI)
chain protein.
Length = 345
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGPRG AG +G+ G
Sbjct: 203 GPEGPRGLAGEVGNKG 218
>M10956-1|AAA52007.1| 225|Homo sapiens COL5A2 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 116 LPGPQGPRGDKGDHGDRGD 134
>J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein.
Length = 463
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAP 282
RGPEGP+G G G G + +P
Sbjct: 395 RGPEGPQGQRGETGPPGPVGSP 416
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGP+G AG GD G
Sbjct: 811 GPEGPKGRAGPTGDPG 826
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGP+G AG GD G
Sbjct: 695 GPEGPKGRAGPTGDPG 710
>BC086874-1|AAH86874.1| 1139|Homo sapiens COL5A2 protein protein.
Length = 1139
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 760 LPGPQGPRGDKGDHGDRGD 778
>BC065509-1|AAH65509.1| 1019|Homo sapiens collagen, type VI, alpha 2
protein.
Length = 1019
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGPRG AG +G+ G
Sbjct: 448 GPEGPRGLAGEVGNKG 463
>BC043613-1|AAH43613.1| 503|Homo sapiens COL5A2 protein protein.
Length = 503
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 124 LPGPQGPRGDKGDHGDRGD 142
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 208 GTLRGPEGPRGAAGTLGDTGDLAAP 282
G GP GP G G +GD GD P
Sbjct: 1336 GKAEGPPGPPGDRGPVGDRGDRGEP 1360
>AY029208-1|AAA52056.2| 1019|Homo sapiens type VI collagen alpha 2
chain precursor protein.
Length = 1019
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGPRG AG +G+ G
Sbjct: 448 GPEGPRGLAGEVGNKG 463
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen
alpha 2 chain protein.
Length = 1347
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAP 282
RGPEGP+G G G G + +P
Sbjct: 243 RGPEGPQGQRGETGPPGPVGSP 264
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 968 LPGPQGPRGDKGDHGDRGD 986
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGP+G AG GD G
Sbjct: 811 GPEGPKGRAGPTGDPG 826
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha 1
protein.
Length = 1860
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 208 GTLRGPEGPRGAAGTLGDTGDLAAP 282
G GP GP G G +GD GD P
Sbjct: 1336 GKAEGPPGPPGDRGPVGDRGDRGEP 1360
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha 1
protein.
Length = 1860
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 208 GTLRGPEGPRGAAGTLGDTGDLAAP 282
G GP GP G G +GD GD P
Sbjct: 1336 GKAEGPPGPPGDRGPVGDRGDRGEP 1360
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGP+G AG GD G
Sbjct: 772 GPEGPKGRAGPTGDPG 787
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGP+G AG GD G
Sbjct: 823 GPEGPKGRAGPTGDPG 838
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTG 267
GPEGP+G AG GD G
Sbjct: 811 GPEGPKGRAGPTGDPG 826
>AC133106-1|AAY24185.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 124 LPGPQGPRGDKGDHGDRGD 142
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 217 RGPEGPRGAAGTLGDTGDLAAP 282
RGPEGP+G G G G + +P
Sbjct: 398 RGPEGPQGQRGETGPPGPVGSP 419
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGD 270
L GP+GPRG G GD GD
Sbjct: 1123 LPGPQGPRGDKGDHGDRGD 1141
>AB058773-1|BAB47499.1| 832|Homo sapiens KIAA1870 protein protein.
Length = 832
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 208 GTLRGPEGPRGAAGTLGDTGDLAAP 282
G GP GP G G +GD GD P
Sbjct: 308 GKAEGPPGPPGDRGPVGDRGDRGEP 332
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
+RG GP GAAG GD G P
Sbjct: 93 MRGDRGPPGAAGDKGDKGPTGVP 115
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4
chain protein.
Length = 1690
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
+RG GP GAAG GD G P
Sbjct: 93 MRGDRGPPGAAGDKGDKGPTGVP 115
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
GP+GP+G G++GD G + P R GP+ PRG PP
Sbjct: 600 GPQGPKGQKGSVGDPG-MEGPMGQRG----REGPM-GPRGEAGPP 638
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
L+GP GP G G GD GD P
Sbjct: 949 LQGPPGPPGPQGPKGDKGDPGVP 971
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
GP+GP+G G++GD G + P R GP+ PRG PP
Sbjct: 635 GPQGPKGQKGSVGDPG-MEGPMGQRG----REGPM-GPRGEAGPP 673
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
L+GP GP G G GD GD P
Sbjct: 984 LQGPPGPPGPQGPKGDKGDPGVP 1006
>M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein.
Length = 349
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
GP+GP+G G++GD G + P R GP+ PRG PP
Sbjct: 93 GPQGPKGQKGSVGDPG-MEGPMGQRG----REGPM-GPRGEAGPP 131
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
GP+GP+G G++GD G + P R GP+ PRG PP
Sbjct: 600 GPQGPKGQKGSVGDPG-MEGPMGQRG----REGPM-GPRGEAGPP 638
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
L+GP GP G G GD GD P
Sbjct: 949 LQGPPGPPGPQGPKGDKGDPGVP 971
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
GP+GP+G G++GD G + P R GP+ PRG PP
Sbjct: 600 GPQGPKGQKGSVGDPG-MEGPMGQRG----REGPM-GPRGEAGPP 638
>AL133481-1|CAH72723.1| 228|Homo sapiens chromosome 10 open reading
frame 56 protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 268 PPCPRVYPRRREVPLVPAVSPR 203
PP PR PR+ E L+P +PR
Sbjct: 186 PPAPRATPRQPEETLLPCATPR 207
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 214 LRGPEGPRGAAGTLGDTGDLAAP 282
+RG GP GAAG GD G P
Sbjct: 93 MRGDRGPPGAAGDKGDKGPTGVP 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,043,796
Number of Sequences: 237096
Number of extensions: 1467087
Number of successful extensions: 9827
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 4779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9523
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -