Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1170X
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015199-1|AAT94428.1|  335|Drosophila melanogaster RE69682p pro...    73   2e-13
AE014298-2505|AAF48684.1|  335|Drosophila melanogaster CG13001-P...    73   2e-13
BT021236-1|AAX33384.1|  783|Drosophila melanogaster RH08748p pro...    30   1.5  
AE014134-211|AAF51409.2|  783|Drosophila melanogaster CG33979-PB...    30   1.5  
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         29   4.6  
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    29   4.6  
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    29   4.6  

>BT015199-1|AAT94428.1|  335|Drosophila melanogaster RE69682p
           protein.
          Length = 335

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +1

Query: 19  ALEQDFITVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
           +   DF  V+LRQQPPPMKSCLSCHQQIHRNAPICPLC
Sbjct: 282 SFRSDF-NVNLRQQPPPMKSCLSCHQQIHRNAPICPLC 318


>AE014298-2505|AAF48684.1|  335|Drosophila melanogaster CG13001-PA
           protein.
          Length = 335

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +1

Query: 19  ALEQDFITVSLRQQPPPMKSCLSCHQQIHRNAPICPLC 132
           +   DF  V+LRQQPPPMKSCLSCHQQIHRNAPICPLC
Sbjct: 282 SFRSDF-NVNLRQQPPPMKSCLSCHQQIHRNAPICPLC 318


>BT021236-1|AAX33384.1|  783|Drosophila melanogaster RH08748p
           protein.
          Length = 783

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 58  QPPPMKSCLSCHQQIHRN 111
           QPPP KSCLS H   H++
Sbjct: 142 QPPPTKSCLSRHNSTHQS 159


>AE014134-211|AAF51409.2|  783|Drosophila melanogaster CG33979-PB,
           isoform B protein.
          Length = 783

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 58  QPPPMKSCLSCHQQIHRN 111
           QPPP KSCLS H   H++
Sbjct: 142 QPPPTKSCLSRHNSTHQS 159


>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
           G  GP G AGT G  G     R I++  L V+ P  S     P P
Sbjct: 126 GSRGPSGEAGTSGGAGGTGGVRRIKSAALEVLCPQPSVSNLSPHP 170


>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
           EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
           G  GP G AGT G  G     R I++  L V+ P  S     P P
Sbjct: 579 GSRGPSGEAGTSGGAGGTGGVRRIKSAALEVLCPQPSVSNLSPHP 623


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
           protein.
          Length = 3433

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 220 GPEGPRGAAGTLGDTGDLAAPRCIRT*FLLVVGPLVSPRGYVPPP 354
           G  GP G AGT G  G     R I++  L V+ P  S     P P
Sbjct: 590 GSRGPSGEAGTSGGAGGTGGVRRIKSAALEVLCPQPSVSNLSPHP 634


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,425,193
Number of Sequences: 53049
Number of extensions: 430788
Number of successful extensions: 1317
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)