Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1167
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5W4 Cluster: Sericotropin; n=4; Ditrysia|Rep: Serico...    60   2e-08
UniRef50_Q6PEK6 Cluster: OPA1 protein; n=7; Bilateria|Rep: OPA1 ...    32   6.5  
UniRef50_Q5A509 Cluster: Putative uncharacterized protein; n=1; ...    32   6.5  
UniRef50_O60313 Cluster: Dynamin-like 120 kDa protein, mitochond...    32   6.5  

>UniRef50_Q2F5W4 Cluster: Sericotropin; n=4; Ditrysia|Rep:
           Sericotropin - Bombyx mori (Silk moth)
          Length = 133

 Score = 60.5 bits (140), Expect = 2e-08
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +1

Query: 1   PHQTAWNYVKCYHEKDPKHALFL 69
           PHQTAWNYVKCYHEKDPKHALFL
Sbjct: 111 PHQTAWNYVKCYHEKDPKHALFL 133


>UniRef50_Q6PEK6 Cluster: OPA1 protein; n=7; Bilateria|Rep: OPA1
           protein - Homo sapiens (Human)
          Length = 276

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 318 HQETSNEINKAMTNTEEN*ILVSIEYVTTTKQNLSNR 208
           H ET NE+ K +   EE+   ++ + +TT ++NL +R
Sbjct: 104 HNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESR 140


>UniRef50_Q5A509 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 157

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +2

Query: 134 SRRYHDYIGEYCNLVWCYYSNFNLYLFDKFCLVVVTYSIETKI*FSSVFVIALFI 298
           +R    +I     L+ C Y  F +Y++  F ++ ++Y I  KI F  +FV ++ +
Sbjct: 29  NREIFIFIRMLTKLLGCIYFVFYMYIYSYFHILYISYPIINKILFVYLFVCSILV 83


>UniRef50_O60313 Cluster: Dynamin-like 120 kDa protein,
           mitochondrial precursor (Optic atrophy protein 1)
           [Contains: Dynamin-like 120 kDa protein, form S1]; n=47;
           Eumetazoa|Rep: Dynamin-like 120 kDa protein,
           mitochondrial precursor (Optic atrophy protein 1)
           [Contains: Dynamin-like 120 kDa protein, form S1] - Homo
           sapiens (Human)
          Length = 960

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 318 HQETSNEINKAMTNTEEN*ILVSIEYVTTTKQNLSNR 208
           H ET NE+ K +   EE+   ++ + +TT ++NL +R
Sbjct: 788 HNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESR 824


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,304,315
Number of Sequences: 1657284
Number of extensions: 7950906
Number of successful extensions: 16961
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16957
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)