Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1167
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.84 
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    24   2.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.9  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 25.8 bits (54), Expect = 0.84
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = -1

Query: 220  FIEQI*IK-VRIITPYKIAIFSDIIMISSR*TRPSYLTLMRYGTVG----LDYVFTRKE 59
            F+ Q+ I+ V + T  ++A F+ + +I S         LM    +G    LDY+FT++E
Sbjct: 974  FLRQVPIRRVHLFTMIQLACFAVLWLIKSFSITSILFPLMLVVMIGVRKSLDYIFTKRE 1032


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 21  LCEMLPRERPEARSFLVNT*SNPTVPYLISV 113
           +CE+LPR +P   S   ++  +PT  ++ +V
Sbjct: 447 VCELLPRLQPRYHSISSSSKLHPTTVHVTAV 477


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 406 AYYSHVTYCTNKTL*ILLLAAYLCMR*KKSPRNIKR 299
           ++ SHV YCT K L        L MR    P+  KR
Sbjct: 763 SWKSHVEYCTTKALRTAKALGCL-MRNHSGPKCAKR 797


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,637
Number of Sequences: 2352
Number of extensions: 9770
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)