Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1167
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC075805-1|AAH75805.1|  960|Homo sapiens optic atrophy 1 (autoso...    32   1.0  
BC058013-1|AAH58013.1|  276|Homo sapiens OPA1 protein protein.         32   1.0  
AB011139-1|BAA25493.1|  978|Homo sapiens KIAA0567 protein protein.     32   1.0  

>BC075805-1|AAH75805.1|  960|Homo sapiens optic atrophy 1 (autosomal
           dominant) protein.
          Length = 960

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 318 HQETSNEINKAMTNTEEN*ILVSIEYVTTTKQNLSNR 208
           H ET NE+ K +   EE+   ++ + +TT ++NL +R
Sbjct: 788 HNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESR 824


>BC058013-1|AAH58013.1|  276|Homo sapiens OPA1 protein protein.
          Length = 276

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 318 HQETSNEINKAMTNTEEN*ILVSIEYVTTTKQNLSNR 208
           H ET NE+ K +   EE+   ++ + +TT ++NL +R
Sbjct: 104 HNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESR 140


>AB011139-1|BAA25493.1|  978|Homo sapiens KIAA0567 protein protein.
          Length = 978

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 318 HQETSNEINKAMTNTEEN*ILVSIEYVTTTKQNLSNR 208
           H ET NE+ K +   EE+   ++ + +TT ++NL +R
Sbjct: 806 HNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESR 842


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,915,278
Number of Sequences: 237096
Number of extensions: 1154609
Number of successful extensions: 1583
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)