Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1164
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.39 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   6.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   6.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   6.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 616  PASFLIGMQPNESINYCDFNYGLPHTLEWDILQTYPSPETGNKSPY 753
            P +   G+  N   + CD+ Y +       + Q Y  P+ G   PY
Sbjct: 1231 PQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQKYQLPKMGGPQPY 1276


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 527 QP*RLYCISTPTGIKNP 577
           QP R YCI  P G  NP
Sbjct: 332 QPWRSYCIQPPCGQLNP 348


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 431 HIFIPPNSVSAFCVFVKKKIQQVTKF 354
           +IFI    V + C  V++K  QV+KF
Sbjct: 369 YIFIAVGIVGSACTDVEQKFFQVSKF 394


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 664 CDFNYGLPHTLEWDILQTYPSPETGNK 744
           CDF +    TL WD  Q  P    GN+
Sbjct: 803 CDFLHEDNTTLVWDNEQQVPFAYRGNQ 829


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 INSVCGLWFILYLAVENSA 186
           IN  C LW+I   AV N++
Sbjct: 169 INMNCALWYINCRAVGNAS 187


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 INSVCGLWFILYLAVENSA 186
           IN  C LW+I   AV N++
Sbjct: 169 INMNCALWYINCRAVGNAS 187


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 INSVCGLWFILYLAVENSA 186
           IN  C LW+I   AV N++
Sbjct: 169 INMNCALWYINCRAVGNAS 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,984
Number of Sequences: 336
Number of extensions: 4296
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)