Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1161X
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   0.78 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.5  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = -1

Query: 427 IKTETRKKQ*IKKHKYFVIIQIWRSNMTIIIYRCWIKIAVKSFCHLNTFSM 275
           +KT  +K++ + K+ YF ++       + + Y  +++IA K    L  F++
Sbjct: 119 LKTRDQKERNLFKNAYFQLVLSISVYSSSVGYTQYVRIAAKGLPTLKLFAL 169


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 375 TKYLCFFIYCFFRVSVFIYFAVIFVLSV 458
           TK  C++ Y FF   V + + V+ + S+
Sbjct: 110 TKRYCYYYYAFF--GVHLAYGVVIIYSI 135


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 443 NDCKINKNRNAKKTVDK 393
           NDCK+N   N    VDK
Sbjct: 70  NDCKVNPCENGGTCVDK 86



 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 443 NDCKINKNRNAKKTVDKEAQIFCHNTN 363
           +DC  N  RN    VD+ A   C+  N
Sbjct: 108 DDCSPNPCRNNGSCVDRIADFECNCKN 134


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 360 HICIMTKYLCFFIYCFFRVSVFIY 431
           H   M+++LC   Y +F    +IY
Sbjct: 72  HFSFMSRFLCLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 360 HICIMTKYLCFFIYCFFRVSVFIY 431
           H   M+++LC   Y +F    +IY
Sbjct: 28  HFSFMSRFLCLPFYSYFFYLSYIY 51


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -3

Query: 431 INKNRNAKKTVDKEAQIFCHNTNMAVKYDNNNLQMLDK 318
           +N      K+++K     CH      + DNN L  L K
Sbjct: 120 MNSLSRVLKSIEKHQGAVCHLETRPNQSDNNQLDALVK 157


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 372 MTKYLCFFIYCFFRVSVFIYFAV 440
           +T ++CF  Y +    +F +FA+
Sbjct: 58  VTLHVCFNSYMYAFTHIFFFFAI 80


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 379 NICASLSTVFFAFLFLFILQSFS 447
           N+C   ++++    FLF+L +FS
Sbjct: 223 NLCQVANSIYGFQNFLFVLSTFS 245


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 269 SSHGKGVKMAKRLDSYLYPASVDYYCH 349
           ++ G  +K  + + +Y  P S+D Y H
Sbjct: 469 AARGLDIKDVQHVINYDLPKSIDEYVH 495


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 540 RNIHYTTKYALIIFISNLHHHILEL 466
           +N    T+ A++  I  LHHH+ +L
Sbjct: 208 KNFATKTQSAVLGKICTLHHHLSKL 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,869
Number of Sequences: 336
Number of extensions: 2960
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)