Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1158
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -2

Query: 618 RFEGRGSRCNYTETLELISQDGWR 547
           ++ G      Y E +EL  + GW+
Sbjct: 289 KYTGEAGMLGYNEIVELQKEGGWK 312


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/40 (20%), Positives = 18/40 (45%)
 Frame = +3

Query: 24  VFLIRACYMTMLKIYQCVHSSLRDTSLRKILFDARWSVKQ 143
           +F++    + + + Y C  S     +L  + F  +W+  Q
Sbjct: 238 LFVLSTFSICITQFYYCYDSGFNSDNLTDVYFTLQWAFLQ 277


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 24/114 (21%), Positives = 41/114 (35%)
 Frame = -2

Query: 627 EAFRFEGRGSRCNYTETLELISQDGWRHLRCSYLWALVTTNTI*WARNKSTHLSNKKKLR 448
           +A R+ G      Y E +E  +  GW     + +W         +  N+     N K + 
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW-----TTVWDDEQKTPYMYKGNQWVGYDNPKSIA 344

Query: 447 LLVAQAVENRYFIGYGQLTFSLDHFQVVGRVMGQRLRALKALLT*SHLRKELLP 286
           + V Q  ++    G    +   D F  +     Q L A+ A L    +  E +P
Sbjct: 345 IKV-QYAKSLNLAGVMIWSIETDDFNGLSGTKYQILNAINAALKSDEIPPEPVP 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,658
Number of Sequences: 336
Number of extensions: 2868
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)