Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1158
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.8  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   6.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.5  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 414  FIGYGQLTFSLDHFQ 370
            FIG+  LT +LDH++
Sbjct: 1632 FIGFNMLTMTLDHYK 1646


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 298 FSEMGSREKSFQGTEPLPHDPTNDLEMVERKGKL 399
           F   GS+ + ++  + L   P ND ++VER G+L
Sbjct: 308 FDIEGSKMR-YEAGDHLAMYPVNDRDLVERLGRL 340


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 448  PTSRASRRKSVFYRLWSTYLFARPFPSRW*GHGAAAPCPESSS 320
            P+ R  RR+ V  RL    L  R   +R   HGA  P P + S
Sbjct: 1083 PSPRTERRREV-NRLAVARLRERQRAARAEMHGAYQPAPSNDS 1124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,793
Number of Sequences: 2352
Number of extensions: 11645
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)