Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1155
         (794 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr...    31   4.8  
BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled recep...    30   8.4  
BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled recep...    30   8.4  
AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled recep...    30   8.4  
AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coup...    30   8.4  
AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane hel...    30   8.4  

>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated
           protein 1B protein.
          Length = 2468

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +1

Query: 31  QKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 210
           +KE  K+ + +   E K  ++ + KL   D K  + PL +      +K ++  K+   KK
Sbjct: 710 KKEVKKEEKKEVKKEEKEPKKEIKKLPK-DAKKSSTPLSEAKKPAALKPKVPKKEESVKK 768

Query: 211 DVALAKVPNAEDKLK 255
           D   A  P  + K+K
Sbjct: 769 DSVAAGKPKEKGKIK 783


>BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 120 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQ 7
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQ 216


>BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 120 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQ 7
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQ 216


>AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 120 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQ 7
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQ 216


>AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 120 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQ 7
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQ 216


>AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -3

Query: 120 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQ 7
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQ 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,049,625
Number of Sequences: 237096
Number of extensions: 2190022
Number of successful extensions: 3944
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3944
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)