BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1155
(794 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 44 2e-06
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 40 2e-05
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 39 5e-05
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 39 6e-05
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 38 1e-04
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 38 1e-04
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 34 0.001
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 28 0.087
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 27 0.27
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 25 1.1
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 1.4
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 23 2.5
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 23 2.5
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 4.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 4.3
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 23 4.3
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 23 4.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 7.5
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 7.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 7.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 7.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 7.5
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 43.6 bits (98), Expect = 2e-06
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 25 DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLM-TKDGK 201
DE +E K+R C+ ETK + V + G+F E+E LK Y C+L K +M K+GK
Sbjct: 30 DEFREMTSKYRKKCIGETKTTIEDVEATEYGEF-PEDEKLKCYFNCVLEKFNVMDKKNGK 88
Query: 202 FKKDVALAKVPNA 240
+ ++ +P A
Sbjct: 89 IRYNLLKKVIPEA 101
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 243 RQIEVEKLIDACLANKGNSPHQTAWNYVKCYHEKDP 350
++I VE +ID+C + + ++ ++KC +E +P
Sbjct: 103 KEIGVE-MIDSCSNVDSSDKCEKSFMFMKCMYEVNP 137
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 40.3 bits (90), Expect = 2e-05
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 55 RADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVP 234
+ DC E+K + K+K GD + +++ LK Y C + K ++ K+ + AL +P
Sbjct: 26 KKDCRKESKVSWAALKKMKAGDMEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLP 85
Query: 235 NA-EDKLK 255
+ +D K
Sbjct: 86 RSMQDSTK 93
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 39.1 bits (87), Expect = 5e-05
Identities = 17/70 (24%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 4 VLAQALTDEQ-KENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ 180
V A+T E+ K ++ + C+ ET +++++++ G+ E+E ++ Y CM+ K
Sbjct: 12 VCVGAMTHEELKTGIQTLQPICVGETGTSQKIIDEVYNGNVNVEDENVQSYVECMMKKFN 71
Query: 181 LMTKDGKFKK 210
++ ++G F +
Sbjct: 72 VVDENGNFNE 81
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 38.7 bits (86), Expect = 6e-05
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 4 VLAQALT-DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ 180
+ A+T +E K L+ + C +E+ D+Q V+ + +F E+E ++Y C+L +
Sbjct: 12 ICVNAMTIEELKIQLRDVQEICKAESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFN 71
Query: 181 LMTKDGKFKKDV 216
++ + G FK+++
Sbjct: 72 IVDESGNFKENI 83
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 37.9 bits (84), Expect = 1e-04
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 VLAQALT-DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ 180
V ALT +E K L ++ C +ET D+Q N + G+ E++ ++ Y C+L
Sbjct: 12 VCVGALTIEELKTRLHTEQSVCKTETGIDQQKANDVIEGNIDVEDKKVQLYCECILKNFN 71
Query: 181 LMTKDGKFK 207
++ K+ FK
Sbjct: 72 ILDKNNVFK 80
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 37.5 bits (83), Expect = 1e-04
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 4 VLAQALT-DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ 180
+ A+T +E K L + C +E+ D+Q V+ + +F E+E ++Y C+L +
Sbjct: 12 ICVNAMTIEELKIQLHDVQEICKTESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFN 71
Query: 181 LMTKDGKFKKDV 216
++ + G FK+++
Sbjct: 72 IVDESGNFKENI 83
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 13 QALTDEQKENLKKH-RADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMT 189
++++ +Q E L K+ R CL + E+LV+ ++ G+F +++ L+ Y C ++K
Sbjct: 22 KSMSADQVEKLAKNMRKSCLQKIAITEELVDGMRRGEFPDDHD-LQCYTTC-IMKLLRTF 79
Query: 190 KDGKFKKDVALAKV 231
K+G F D+ + ++
Sbjct: 80 KNGNFDFDMIVKQL 93
Score = 22.2 bits (45), Expect = 5.7
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +3
Query: 306 QTAWNYVKCYHEKDPKHALF 365
Q + YV+C+++++P+ F
Sbjct: 123 QKTYQYVQCHYKQNPEKFFF 142
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 28.3 bits (60), Expect = 0.087
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 64 CLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDV 216
C ET D+Q + + G+ E+E ++ ++ C++ K G F + V
Sbjct: 33 CRIETSIDQQKEDDFRDGNIDVEDEKVQLFSECLIKKFNGYDDGGNFNEVV 83
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 26.6 bits (56), Expect = 0.27
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 4 VLAQALTDEQKE-NLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ 180
V ALT E+ + L+ C ++ DE+ + + G ENE ++ ++ C++ K
Sbjct: 12 VCVGALTLEELQIGLRAVIPVCRIDSGIDEKKEDDFRNGIIDVENEKVQLFSECLIKKFN 71
Query: 181 LMTKDGKFKKDV 216
G F + V
Sbjct: 72 AYDDGGNFNEVV 83
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 252 EVEKLIDACLANKGNSPHQTAWNYVKCY 335
EV KLI C A H + +KC+
Sbjct: 96 EVNKLITECSAISDADIHLKSSKLIKCF 123
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 24.6 bits (51), Expect = 1.1
Identities = 5/22 (22%), Positives = 15/22 (68%)
Frame = -2
Query: 400 VWNGWVGLCVYKKRACFGSFSW 335
+W+G+ C+++++ F + +W
Sbjct: 356 LWSGFCSQCIWQEKIVFAAVTW 377
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 585 YDEHRRKLNFGSRSNMLQQLN 523
YD HR ++NFGS + +++N
Sbjct: 178 YDTHRCRINFGSWVHSGEEVN 198
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 255 VEKLIDACLANKGNSPH-QTAWNYVKCYHEKD 347
VE +++ C ++ + AW + KC +E D
Sbjct: 108 VESVVETCKKEVTSTEGCEVAWQFGKCIYEND 139
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 255 VEKLIDACLANKGNSPH-QTAWNYVKCYHEKD 347
VE +++ C ++ + AW + KC +E D
Sbjct: 82 VESVVETCKKEVTSTEGCEVAWQFGKCIYEND 113
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -3
Query: 780 FQYYGSYCCTKNIKFAKKVNVALT*AYYSH 691
F+ YG + +K AK++ A YY++
Sbjct: 189 FEKYGQLFMEETLKAAKRMRPAANWGYYAY 218
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 614 QETSNEINKAMTNTEEN*ILVLDRIC 537
Q S E+N +TN + +V+DR+C
Sbjct: 505 QLKSEELNAKVTNDWKFAAMVIDRMC 530
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = +3
Query: 246 QIEVEKLIDACLANKGNSPHQTAWNYVKCYHEKDP 350
Q + ++ CL G+ +N KC E P
Sbjct: 104 QERAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAP 138
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = +3
Query: 246 QIEVEKLIDACLANKGNSPHQTAWNYVKCYHEKDP 350
Q + ++ CL G+ +N KC E P
Sbjct: 104 QERAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAP 138
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 624 KKSPRNIKRDKQSYDEHRRKLNFGSRSNMLQQLNKIYR 511
+K PR +++ Y EHR + F +L +L++ R
Sbjct: 402 RKLPREMRQRITEYFEHRYQGKFFDEELILGELSEKLR 439
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 363 KERASGLSRGSISHNSRLFGEG 298
K+R G SR +S++ R+ G G
Sbjct: 12 KDRFDGASRVMVSNSDRVRGNG 33
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 624 KKSPRNIKRDKQSYDEHRRKLNFGSRSNMLQQLNKIYR 511
+K PR +++ Y EHR + F +L +L++ R
Sbjct: 370 RKLPREMRQRITEYFEHRYQGKFFDEELILGELSEKLR 407
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 363 KERASGLSRGSISHNSRLFGEG 298
K+R G SR +S++ R+ G G
Sbjct: 13 KDRFDGASRVMVSNSDRVRGNG 34
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 7.5
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 124 KTENEPLKKYAL-CMLI-KSQLMTKDGKFKKDVALAKVPNAEDKLK*RS*LTLAWPT 288
K N P K Y + C + K + + G K +A + +AEDK + T+ PT
Sbjct: 50 KLNNIP-KSYGIKCEIYAKCEFLNPGGSVKDRIAYRMIQDAEDKGLLKPGCTIIEPT 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,408
Number of Sequences: 438
Number of extensions: 4275
Number of successful extensions: 28
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -