Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1154X
         (379 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    26   0.53 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   2.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   3.7  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   3.7  

>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 372 TWPAPKPKGTRWKCKKGKIPVKSLVYP-YRKETP 274
           +WP P P  T       K   +S+VYP YR+ TP
Sbjct: 638 SWPLPPPYITEPVEGPAKKEPESVVYPIYRRTTP 671


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 231 LPLFSVVFRINSASPGFPSCRGKPG 305
           LP      + +   PGFP   G+PG
Sbjct: 467 LPATVAAIKGDKGEPGFPGAIGRPG 491


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 331 QKRKNPSEKPGLPLQEGNPGDAEL 260
           +++ NPS  P +    G P D EL
Sbjct: 397 REKSNPSRPPSVAGSYGKPNDHEL 420



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 322 KNPSEKPGLPLQEGNPGDAELMRKTTEKRGRS 227
           K+PS+ PGL  +  N       R T+++R  +
Sbjct: 598 KSPSKIPGLARRPENISSESRSRSTSKQRANA 629


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 352 QRNQVEMQKRKNPSEKPG 299
           Q+NQ++ Q++  P ++PG
Sbjct: 121 QKNQMKRQQQHQPPQQPG 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,639
Number of Sequences: 2352
Number of extensions: 6363
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)