Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1152
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 38 0.008
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 35 0.058
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 34 0.10
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 33 0.18
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 32 0.41
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 32 0.41
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 32 0.54
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 32 0.54
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 31 1.3
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 31 1.3
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 30 1.7
SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6) 30 2.2
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 30 2.2
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 29 2.9
SB_25699| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37) 29 2.9
SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8) 29 2.9
SB_18220| Best HMM Match : Vicilin_N (HMM E-Value=4.3) 29 2.9
SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9) 29 2.9
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_26210| Best HMM Match : Brevenin (HMM E-Value=4.2) 29 3.8
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1) 29 3.8
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 29 3.8
SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36) 29 5.1
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 29 5.1
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 29 5.1
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 29 5.1
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.1
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 28 6.7
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 28 6.7
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 28 6.7
SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30) 28 6.7
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 28 6.7
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 6.7
SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37) 28 6.7
SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 28 8.9
SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4) 28 8.9
SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20) 28 8.9
SB_4239| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 121 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
PE+ T +P++ PV+K P K E E+ ++ PED P +K
Sbjct: 70 PEDRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKPEDK 114
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 109 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
++ +P+ T PK SP K+ K+ N E+ T+ PED P EK
Sbjct: 39 RKTSPKTSPKTSPKTSP--KTSQKQAGRQAGNKPEDRTEYKPEDKPVEK 85
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 103 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
D+ E PE+ + E + P KK E + E+ ++ ED P +K
Sbjct: 72 DRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKPEDKQEDKPEDK 122
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE 237
D DK+E PE+ +P+ P K + E E ++N D+ E
Sbjct: 109 DKPEDKQEDKPEDKQEDKPEAKPEDKPEDEPEEKPEDQPEDNNEDKPGE 157
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPK 267
D DK++ PE+ +P++ P K P K E + N + ++ PED P +K K
Sbjct: 433 DKPEDKQQNKPEDKPEDKPEDKPEDK-PEDKPEDKQQNKPKYKPEDKPEDKPEDKPKDK 490
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
D DK E PE+ +PK P K P K E + ++ ++ PED P EK
Sbjct: 453 DKPEDKPEDKPEDKQQNKPKYKPEDK-PEDKPE----DKPKDKLEDRPEDKPEEK 502
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPED 240
D +K + PE+ +P++ P K + + E K+N D+ PED
Sbjct: 465 DKQQNKPKYKPEDKPEDKPEDKPKDKLEDRPEDKPEEKSKDNPEDK-PED 513
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 34.7 bits (76), Expect = 0.077
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPKESPVKKSPAKKVEA-AESNGKENGTDEAPEDSPAEKVMPKK 270
K E APEEV + + +ESP ++ K+ +A E KE +E ED+ E PKK
Sbjct: 242 KVEDAPEEVEAPKEEESPKEEDTPKEEDAPKEDTPKEEAKEEPKEDTKEE---PKK 294
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +1
Query: 88 ADAAVDKKEVAPEEVTSTEPKESPVKKS----PAKKVEAAESNGKENGTDEAPEDSPAE 252
A+ +K E PEE E KE ++ P + EAAE G GT++ PED +E
Sbjct: 33 AEKQPEKVEDKPEEPAKDEEKEEAATEAEAEDPKEDPEAAEIPG---GTEDLPEDEYSE 88
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 103 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAP--EDSPAEKVMPKKAT 276
+K P+E +E+P +++P KVE A + +E+P ED+P E+ PK+ T
Sbjct: 218 NKTPEEPKEDEKVTEEETPKEETP--KVEDAPEEVEAPKEEESPKEEDTPKEEDAPKEDT 275
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
D DK E PEE +P+E P + +P K E + + E+ ++ PE P +K
Sbjct: 304 DKLEDKPEDRPEEKPEDKPEEKP-EDNPEDKPEYKQEDKPEDKQEDKPECKPEDK 357
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 112 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
E++P+ T+ K S +K+ K+ + +N E+ DE PED+P +K
Sbjct: 18 EISPKTGRKTDRKTS--RKTSLKR--SLTTNKPEDNADEKPEDNPEDK 61
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 85 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMP 264
M D DK E PE+ +PK+ KS K + E N E+ ++ P D P +K
Sbjct: 1 MEDKPEDKPEDKPEDKPEGKPKDKSEDKSGDKPQDKPE-NKPEDQPEDKPGDKPEDKTED 59
Query: 265 K 267
K
Sbjct: 60 K 60
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 112 EVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
EV PEEV + K +PV+ P + E S E E PE P+EK
Sbjct: 725 EVVPEEVEVDVKQTKSTPVESEPTETPEVVPSEKLEGIQAEVPEVMPSEK 774
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 32.3 bits (70), Expect = 0.41
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 109 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP-------AEKVMPK 267
+EV P++ TE + P+K+ P + E + E +E P + P EKV PK
Sbjct: 6215 EEVKPKKEKPTEREAKPLKEKPLVE-EKELTVSVEKAVEEKPLEKPIARKEKKVEKVKPK 6273
Query: 268 KATMHLRTVMPQKRKRLV 321
K R P + K LV
Sbjct: 6274 KEKPTEREAKPLEEKHLV 6291
Score = 31.1 bits (67), Expect = 0.95
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +1
Query: 82 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVE---AAESNGKENGTDE--APEDSP 246
T+ + +EV P++ TE + P ++ P + E +AE +E ++ A ++
Sbjct: 5084 TITRKEIKVEEVKPKKGKPTEREAKPFEEKPLIEEELPISAEKVVEEKPLEKPIARKEKK 5143
Query: 247 AEKVMPKKATMHLRTVMPQKRKRLV 321
EKV PKK R P + K LV
Sbjct: 5144 VEKVKPKKEKPTEREAKPLEEKHLV 5168
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 100 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATM 279
+ +KE EEV + K + + P K+ E ++A E+ P EK + +K
Sbjct: 6207 IARKEKKVEEVKPKKEKPTEREAKPLKEKPLVEEKELTVSVEKAVEEKPLEKPIARK-EK 6265
Query: 280 HLRTVMPQKRK 312
+ V P+K K
Sbjct: 6266 KVEKVKPKKEK 6276
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +1
Query: 100 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATM 279
+ +KE EEV K + + P K+ E ++A E+ P EK + +K
Sbjct: 5613 ITRKEKKVEEVKPKTEKPTEREAKPLKEKPLVEEKELTVSVEKAVEEKPLEKPITRK-EK 5671
Query: 280 HLRTVMPQKRK 312
+ V P+K K
Sbjct: 5672 KVEEVKPKKEK 5682
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 100 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATM 279
+ +KE EEV + K + + P ++ E ++A E+ P EK + +K
Sbjct: 5507 ITRKEKKVEEVKPKKEKPTEREAKPLEEKPLVEEKELPVSAEKAVEEKPLEKPIARK-EK 5565
Query: 280 HLRTVMPQKRK 312
+ V P+K K
Sbjct: 5566 KVEEVQPKKEK 5576
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 100 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDEAPEDSPAEKVMPKKAT 276
V K+ P E + +E P+ K V A ++ K P+D E+V PKK
Sbjct: 5200 VKPKKEKPMEREAQHLEEKPLLKEKELPVSAEKAIEEKPLEKPFTPKDKKGEEVKPKKEK 5259
Query: 277 MHLRTVMPQKRKRLV*RGNL 336
R P + K LV + L
Sbjct: 5260 PTEREAKPLEEKPLVEKDEL 5279
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 100 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATM 279
+ +KE EEV K + + P K+ E ++A E+ P EK + ++
Sbjct: 6049 ITRKEKKVEEVKPKTEKPTEREAKPLKEKPLVEEKELTVSAEKAVEEKPLEKPITRE-EK 6107
Query: 280 HLRTVMPQKRK 312
+ V P+K K
Sbjct: 6108 KVEEVKPKKEK 6118
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 103 DKKEVAPEEVTSTEP-KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKK 270
D+KE EE+ EP KE PV++ ++ E +E DE P+ PK+
Sbjct: 245 DEKEREQEELVEEEPKKEEPVEEETKQEEPVEEEPKQEEAVDEEPKKEEQVDGEPKQ 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKK 270
++E EE EPK E PV++ P ++ E +E +E P+ + PK+
Sbjct: 32 EEEPKQEEQVEEEPKQEEPVEEEPKQEEPVKEEPKQEEPVEEEPKQEEPVEQKPKQ 87
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKK 270
++E EE EPK E PVK+ P ++ E +E ++ P+ + PK+
Sbjct: 42 EEEPKQEEPVEEEPKQEEPVKEEPKQEEPVEEEPKQEEPVEQKPKQEEPVEEEPKQ 97
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKK 270
K+E EE EPK E PV++ P ++ E +E +E + K PK+
Sbjct: 62 KEEPKQEEPVEEEPKQEEPVEQKPKQEEPVEEEPKQEEPVEEEQKQEEPVKEEPKQ 117
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 100 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKK 270
V+++ E V + +E PVK+ P ++ + E E +E P+ + PK+
Sbjct: 91 VEEEPKQEEPVEEEQKQEEPVKEEPKQEGQVEEEPKLEEPVEEEPKQEEPVEEEPKQ 147
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +1
Query: 76 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 252
+ MAD E P E T T E+ K+P+ E E G+E + +++ E
Sbjct: 32 IQNMADEEGKATEATPPEATETPAAEAAPAKAPSADAEVQEEAGEETASATQADEATTE 90
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 31.9 bits (69), Expect = 0.54
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +1
Query: 79 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKV 258
A A+A +KK APEE + + K+ V++S K A +G+ N D+ +
Sbjct: 58 AKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKD---ASKDGEGNAADK------RARG 108
Query: 259 MPKKATMHLRTVMPQKRK 312
PKKA T P+K K
Sbjct: 109 RPKKADGEPATKKPKKVK 126
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 31.5 bits (68), Expect = 0.72
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Frame = +1
Query: 88 ADAAVDKKEVAPEE-VTSTEPKESPVKKSPAKKVEAAESNGKENGTD--------EAPED 240
+D ++ E+A EE VTS E E V PA+KVEA+ +E G + EAPE+
Sbjct: 823 SDVPTEEAEMATEEAVTSVEEAEDKV---PAEKVEASIEEAEEPGEEVESLLKEAEAPEE 879
Query: 241 SPAEKVMPKKATMHLRTVMPQKRK 312
++V +A + ++ K
Sbjct: 880 EVGDQVEEVEAPVEKAAASVEEAK 903
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 181 KVEAAESNGKENGTDEAPEDSPAEK 255
K E +E+NG ENG +EA E+ PA K
Sbjct: 313 KNEDSEANGDENGHNEASEEKPALK 337
>SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 109 KEVAPEEVTSTEPKESPVKKSP-AKKVEAAESNGKENGTDEAP---EDSPAEKVMP 264
++++ EEV K + + P +KK E + GK+ G D P + P EKV P
Sbjct: 901 EDISQEEVEKRTRKPTIQEPKPDSKKSERKDKKGKDKGADHTPASGDGLPVEKVDP 956
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/77 (28%), Positives = 28/77 (36%)
Frame = +1
Query: 82 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVM 261
T A V E P V + E E S + E E E+ E +D P K
Sbjct: 88 TDASTTVPLYEATPT-VANMEKNEHDGNSSDSGNSEVTEQEHDEDANSEENDDKPTRKTK 146
Query: 262 PKKATMHLRTVMPQKRK 312
KA L + QK+K
Sbjct: 147 LDKAQRKLNKRLRQKKK 163
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 103 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDS 243
+KKE +E TE S KSPA K + S N +D++P S
Sbjct: 523 EKKEDEGKEPDKTEQTTSAKSKSPASKDGKSRSQKGSNSSDDSPVKS 569
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKK 270
D D E PE +P++ P +K P KK E + E+ + PED +K KK
Sbjct: 186 DMPEDMPEDKPEYRPEYKPEDKP-EKKPEKKPEDKSEDKPEDKHKDKPEDKLEDKPEDKK 244
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
KKE E+ + +E+ ++ KK E E + K+N +E ED EK
Sbjct: 1880 KKENEEEDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEK 1929
>SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6)
Length = 261
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPV-KKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
D DK E PE+ + ++ P +K P K E + ++ + PED P +K
Sbjct: 107 DTPEDKTEDRPEDKPEDKQQDKPEPEKKPEHKYEDKPGDKSKDKLEVKPEDRPEDK 162
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 103 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATMH 282
D++ VA + V+S P+ A + S G NG+ EAPE+ + V +K
Sbjct: 459 DEEGVAAQGVSSVTPEAGSALSVIALEERGRSSTGSPNGSLEAPEELQEKMVGGEKKG-- 516
Query: 283 LRTVMPQKRKR 315
T + +KRK+
Sbjct: 517 -DTKLKEKRKQ 526
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 88 ADAAVDKKEVAPEEVTSTEPKESPVKKSPA-KKVEAAESNGKENGTDEAPED 240
A AVDK+E P+ E K + SPA KVE + + G+ ED
Sbjct: 104 APQAVDKEEEKPQAADKEEEKSQKEESSPATDKVEPKPAPSEAEGSSLGGED 155
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 255 GDAEESNDASENGDATEKKETG 320
G A E+ +ASE G+A+E ETG
Sbjct: 42 GKASEAGEASETGEASEASETG 63
>SB_25699| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37)
Length = 179
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPKESPVKKSPAKKV-EAAESNGKENGTDEAPEDSPAEKVMPKKA 273
K + A + PK++ KKSP K + A + T + PA+K+ KKA
Sbjct: 107 KPKAAKKPAAKKSPKKAAAKKSPKKAAKKPAAKKATKKPTAKKAAAKPAKKLAAKKA 163
>SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8)
Length = 162
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 124 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPEDSPAEK 255
E+V S+ PK+ +K P KK EA E +E DE E +K
Sbjct: 115 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNEAVKVKK 161
>SB_18220| Best HMM Match : Vicilin_N (HMM E-Value=4.3)
Length = 188
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKK--VEAAESNGKENGTDEAPEDSPAEKV 258
M VD E+ E + +ESP K AKK + E+ G++ PED E +
Sbjct: 1 MESRKVDSLELIESENCEDKQRESPSTKRKAKKDAKKCKETQGEKELGRNTPEDDSEETL 60
Query: 259 MPKK 270
KK
Sbjct: 61 GMKK 64
>SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9)
Length = 100
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 124 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPEDSPAEK 255
E+V S+ PK+ +K P KK EA E +E DE E +K
Sbjct: 53 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNEAVKVKK 99
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 91 DAAVDKKEVAPEEVTSTEPKESPVKKSPA---KKVEAAESNGKENGTD-EAPEDSPAEKV 258
D+ V + ++P + KE P +KSP K A S K N ++ E+ DSP E+
Sbjct: 750 DSPVRQPSLSPSP-SPERKKEDPKEKSPPLPKSKKMANRSYRKHNSSESESDSDSPPERK 808
Query: 259 MPKKATMHLRTVMPQKRKR 315
+ R P +R+R
Sbjct: 809 KGSVSPRDQRRRSPMRRRR 827
>SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 103 DKKEVAPEEVTSTEPKESPVK--KSPAKKVEAAESNGKEN 216
D + AP VTS+ P + P+K K+ + +AA SN + N
Sbjct: 116 DVTQSAPTRVTSSLPSKQPIKSSKTSRSQTKAAPSNARLN 155
>SB_26210| Best HMM Match : Brevenin (HMM E-Value=4.2)
Length = 82
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 112 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEK 255
+V EE S + KES KK K + ES E+G A +D AEK
Sbjct: 18 DVLDEEKDSDDDKESRKKKKDQKSSKKKESALFEDGFKFADDDDFAEK 65
>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
Length = 210
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 88 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPK 267
AD KK+ A + S E +S K+PAKK ES + + K PK
Sbjct: 62 ADEPPKKKKKAESKPKSAEKSKSSKSKTPAKKETKKESKKSPKKSKPVTVKITSGKKTPK 121
Query: 268 KA 273
K+
Sbjct: 122 KS 123
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -1
Query: 251 SAGESSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASAI 84
++ S P SLP S+ L DFLT S S +TSS + S T++S++
Sbjct: 459 TSSSSLSVFPTPSSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 514
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 239 SSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASAI 84
SS S SLP S+ L DFLT S S +TSS + S T++S++
Sbjct: 708 SSSLSDFLTSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 759
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 206 PLLSAASTFLAGDFLTGDSFGSVEVTSSGATS-FLSTAAS 90
P+ FL DFLT S S +TSS + S FLS ++S
Sbjct: 304 PISEQQGIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSS 343
>SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 112 EVAPEEVTSTEPKESPVKKS---PAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATMH 282
EV+ EV S EP+E+P + PA E ++G + TDE + E P K +
Sbjct: 203 EVSSPEVRSPEPEETPPEPEIIIPAPDFEGFANDGYD--TDEELDKYLGENEAPAKNPVS 260
Query: 283 LRTVMPQKRKRL 318
++P+ + R+
Sbjct: 261 EVPIIPKTKTRV 272
>SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36)
Length = 650
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATMHL 285
K EV ++VT K+ P K V+ + ++ +A + PA+K PKKA
Sbjct: 555 KAEVPKKKVTKKVAKKKPAAKPKKASVKKPAAKKAKSPKKKAAK-KPAKKSTPKKAKKPA 613
Query: 286 RTVMPQK 306
P+K
Sbjct: 614 AKKSPKK 620
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 145 PKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKATMHLRTVMPQKRKR 315
P+ SP+ +EAA SN N D P + P ++ T P+ RKR
Sbjct: 450 PRYFSYSSSPSSLLEAASSNVGRNMRDTGTSPVPFHQDPPSLSSSGQGTFQPKVRKR 506
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 KEVAPEEVTSTEP--KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKKA 273
K VA + + P K +PVK+ AKK S G G P+ PA K KKA
Sbjct: 520 KPVAASKPAAAAPASKPAPVKRPAAKKGPPKPSGGASKG---PPKKKPAVKAGGKKA 573
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 130 VTSTEPKESPVKKSPAKKVEAAE-SNGKENGTDEAPEDSPAEKVMPKK 270
V + P P + PAK AAE GKE DE E +K KK
Sbjct: 363 VEADTPGSEPPAEEPAKPDSAAEQEEGKEGDEDEDGEGGDKKKKKKKK 410
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 124 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTD-EAPEDSPAEKVMPKK-ATMHLRTVM 297
EEV + ++ KK +KK E ++ K TD EA + + ++P+K A + L+
Sbjct: 101 EEVDTESERDEKEKKKRSKKKEKEGTSLKNPLTDQEARTQNNTQTIIPQKLAPIFLQRPK 160
Query: 298 PQK 306
PQK
Sbjct: 161 PQK 163
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 85 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDE--APEDSPAE 252
MA+ VDK+ E + + ++ KK AKK E ++ G ++G DE ED P +
Sbjct: 620 MAEKEVDKEGDKESEKSEKDGEKGDEKKDDAKKQEDEDAEEGADDGYDEYYYDEDEPLQ 678
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 124 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTD-EAPEDSPAEKVMPKK-ATMHLRTVM 297
EEV + ++ KK +KK E ++ K TD EA + + ++P+K A + L+
Sbjct: 1148 EEVDTESERDEKEKKKRSKKKEKEGTSLKNPLTDQEARTQNNTQTIIPQKLAPIFLQRPK 1207
Query: 298 PQK 306
PQK
Sbjct: 1208 PQK 1210
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 115 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-EKVMPKKATMHLRT 291
VAPE + E +PV +A E+ K T APE + A E + + TM T
Sbjct: 4634 VAPETTMAPETTAAPVSTVALVTTKAPETT-KAPETTVAPESTMAPETTVAPETTMAPET 4692
Query: 292 VMPQK 306
+PQ+
Sbjct: 4693 TIPQE 4697
>SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 121 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 246
PE+ T + ++ P K+P + AAE +GKEN A +D+P
Sbjct: 79 PEDSTKKKRRKKP--KTPTRASAAAEESGKENEAFVA-DDTP 117
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 106 KKEVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 246
K + E+ T++ EP + PVK+ P K V KEN ++P+++P
Sbjct: 1150 KMQKTEEKTTASKSEPAQEPVKQPPVKDV-------KENSLPQSPQETP 1191
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 130 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 252
+ S ++S VKKS +K + + ++ + PED PAE
Sbjct: 64 IPSDHKRKSFVKKSASKSKKKRKKRKQQGDEESEPEDIPAE 104
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 255 GDAEESNDASENGDATEKKETGV 323
G+A E+ +ASE G+A+E E GV
Sbjct: 771 GEASEAGEASEVGEASEAGENGV 793
>SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30)
Length = 279
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPEDS---PAEKVMPK 267
K + A + PK++ KKSP AKK A + K+ A + + PA+K K
Sbjct: 202 KPKAAKKPAAKKSPKKAAAKKSPKKAAKKPAAKKPAAKKAAKKPAAKKAAAKPAKKPAAK 261
Query: 268 KAT 276
KAT
Sbjct: 262 KAT 264
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Frame = +1
Query: 151 ESPVKKSPAK-----KVEAAESNGKENGTDEAPEDSPAEK-----VMPKKATMHLRTVMP 300
E P+K PAK K+++ +S+ E +D+ P S ++K V + + V P
Sbjct: 510 EVPIKTKPAKSKKAFKLKSDDSSEDEESSDDGPRGSKSKKHKKRCVSDSDSELEDSPVAP 569
Query: 301 QKRKR 315
+K+KR
Sbjct: 570 KKKKR 574
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 121 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMPKK 270
PEE T + V +P + EA ++ + T++APE S P K
Sbjct: 115 PEETTDVPDRPQEVTTTPDRPQEANDAPDRPQETNDAPERSHEVTNTPDK 164
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 79 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE---DSPA 249
A D++ D +E +PK+ KK+P K+ ++E + + DE P+ D+
Sbjct: 113 AATEDSSSDDDSSGEDE--DEKPKKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKG 170
Query: 250 EKVMPKK 270
+K K+
Sbjct: 171 KKTQAKQ 177
>SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37)
Length = 184
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPEDS---PAEKVMPK 267
K + A + PK++ KKSP AKK A + K+ A + + PA+K K
Sbjct: 107 KPKAAKKPAAKKSPKKAAAKKSPKKAAKKPAAKKPAAKKAAKKPAAKKAAAKPAKKPAAK 166
Query: 268 KAT 276
KAT
Sbjct: 167 KAT 169
>SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 354 FLHQEPQISSSHQSLSFLWHHRSQMHRCF 268
FL + ISSS + LW +RS+ HR F
Sbjct: 398 FLKESGWISSSRFCVVHLWRNRSERHRFF 426
>SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 268 SSASPFQQANLLGLHRYHSLCHY 200
SS+SP ++ HRYH LCH+
Sbjct: 97 SSSSPPLSSSSQSSHRYHPLCHH 119
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 273 NDASENGDATEKKETGVKRKSV 338
+D SEN DAT+ ETG K + V
Sbjct: 738 SDQSENNDATDGSETGDKNQEV 759
>SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4)
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 106 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEKVMP--KKATM 279
KK+ + ++T PK+ V + +K AE E + + E SP+ P KK+T
Sbjct: 295 KKDPTHHKRSTTLPKDLKVHTTAQEKKSVAEDTILEGSEEGSSESSPSSVSSPINKKSTE 354
Query: 280 HLRTVM 297
VM
Sbjct: 355 RKEDVM 360
>SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20)
Length = 1362
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 254 FSAGESSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASA 87
FS G G PF LP++S AS + FG V++ S + +S+ +++
Sbjct: 648 FSLGNPDGRK--PFKLPIISPASVAATSTSTSMPCFGRVDLVLSDVMANISSQSTS 701
>SB_4239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = -3
Query: 327 SSHQSLSFLWHHRSQMHRCFLRHH-----LFSRRIFWGFIGTILFAI-TFCS 190
S+H + H++ H RHH S I WG I I + I T CS
Sbjct: 43 SAHHDSGYYSSHQNDYHHGHKRHHRRSSGWLSSLIMWGIIAAIAYYIYTSCS 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,957,850
Number of Sequences: 59808
Number of extensions: 350767
Number of successful extensions: 1669
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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