Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1151
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         25   3.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   3.2  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     25   3.2  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     25   3.2  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     25   3.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.6  

>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 738 PLDRIRSKYQCVPVIFKQNFFF*CLR 661
           P  +  +KY     +FKQ FFF  LR
Sbjct: 22  PSTKFEAKYADKEFLFKQKFFFEVLR 47


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 623  NKPNLDVLDKYLSLR 667
            NKPNL V+D++L  R
Sbjct: 1082 NKPNLSVIDEFLKKR 1096


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 738 PLDRIRSKYQCVPVIFKQNFFF*CLR 661
           P  +  +KY     +FKQ FFF  LR
Sbjct: 22  PSTKFEAKYADKEFLFKQKFFFEVLR 47


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 738 PLDRIRSKYQCVPVIFKQNFFF*CLR 661
           P  +  +KY     +FKQ FFF  LR
Sbjct: 22  PSTKFEAKYADKEFLFKQKFFFEVLR 47


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 738 PLDRIRSKYQCVPVIFKQNFFF*CLR 661
           P  +  +KY     +FKQ FFF  LR
Sbjct: 22  PSTKFEAKYADKEFLFKQKFFFEVLR 47


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 214 FIMSSVLPLILCNFVCILPRILVVFFGTKI 303
           + ++ +LP +L +F+C+L   L    G K+
Sbjct: 235 YTVNLILPTVLISFLCVLVFYLPAEAGEKV 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,520
Number of Sequences: 2352
Number of extensions: 11655
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)