Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1150
(460 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 132 2e-33
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 132 2e-33
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 108 2e-26
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 106 1e-25
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 23 1.0
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 1.8
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 21 5.5
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 5.5
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 20 9.6
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 20 9.6
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 20 9.6
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 20 9.6
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 12 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 12 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 88 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 164 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 240 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 316 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 375
Query: 183 RLRGG 197
RLRGG
Sbjct: 376 RLRGG 380
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 468 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 527
Query: 183 RLRGG 197
RLRGG
Sbjct: 528 RLRGG 532
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 544 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 603
Query: 183 RLRGG 197
RLRGG
Sbjct: 604 RLRGG 608
Score = 132 bits (319), Expect = 2e-33
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 620 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 679
Query: 183 RLRGG 197
RLRGG
Sbjct: 680 RLRGG 684
Score = 130 bits (313), Expect = 8e-33
Identities = 63/65 (96%), Positives = 63/65 (96%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 392 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVL 451
Query: 183 RLRGG 197
RLRGG
Sbjct: 452 RLRGG 456
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 108 bits (260), Expect = 2e-26
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 161
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 12 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 106 bits (254), Expect = 1e-25
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 161
TITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKE
Sbjct: 60 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
Score = 102 bits (245), Expect = 1e-24
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 54 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 197
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 23.4 bits (48), Expect = 1.0
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 257 GNHFLTVILHGENAKGRFNCTSSKSQNQVKC--GFFLDV 147
G F V G+N + CTSS Q ++C G + D+
Sbjct: 46 GEWFRLVAGEGDNCRDVIQCTSSGLQ-AIRCPAGLYFDI 83
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 1.8
Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
Frame = -1
Query: 124 SSNCF-PAKMRRCWS 83
S+ CF P+K+R CW+
Sbjct: 1112 SNRCFFPSKIRICWN 1126
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.0 bits (42), Expect = 5.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 83 RPTTSHLCRETIRRWPHSFRL*HPERIHT 169
+P +C+ R++ S+ L ER HT
Sbjct: 75 KPKRQFICKYCNRQFTKSYNLLIHERTHT 103
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 101 DETLLVWRNTFLVLDFSF 48
D ++ R +FLV DF F
Sbjct: 479 DAAMMALRTSFLVNDFGF 496
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 340 FGSQIVSVSALCLATVGSTRMKTGIAFTAIIFS 242
FG+ +V L T+GS +++G ++ S
Sbjct: 214 FGTNLVGGIVRSLGTLGSRVVESGTKLANMVIS 246
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 458 FFFFFYMRKTFILSFFCMLR 399
F+F FY+ +LS + + R
Sbjct: 56 FYFSFYITSYTLLSVYSLFR 75
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 458 FFFFFYMRKTFILSFFCMLR 399
F+F FY+ +LS + + R
Sbjct: 56 FYFSFYITSYTLLSVYSLFR 75
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 148 TSRKNPHFTWF*DLEEVQLNLPFAFSP*SITVRK 249
T K+ + + DL+ ++L F F IT+++
Sbjct: 153 TRTKDKYRVVYTDLQRIELEKEFTFVSKYITIKR 186
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,063
Number of Sequences: 336
Number of extensions: 2306
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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