Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1150
(460 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 163 7e-41
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 163 7e-41
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 135 1e-32
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 134 3e-32
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 134 3e-32
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 86 1e-17
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 74 6e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 60 1e-09
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 60 1e-09
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 55 3e-08
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 43 9e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 40 0.001
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 40 0.001
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 39 0.002
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 39 0.002
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 32 0.17
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 0.23
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 30 0.70
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.2
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 2.1
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 5.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 5.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 5.0
Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical pr... 27 6.6
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 27 6.6
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 163 bits (395), Expect = 7e-41
Identities = 79/84 (94%), Positives = 80/84 (95%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
Query: 183 RLRGGTIEPSLRILAMKYNCEKMI 254
RLRGG IEPSLR LA KYNC+K I
Sbjct: 72 RLRGGIIEPSLRQLAQKYNCDKQI 95
Score = 54.8 bits (126), Expect = 3e-08
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 254 CRKCYARLHPRATNCRKTKCGHTNNLR 334
CRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 96 CRKCYARLPPRASNCRKKKCGHSSELR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 163 bits (395), Expect = 7e-41
Identities = 79/84 (94%), Positives = 80/84 (95%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
Query: 183 RLRGGTIEPSLRILAMKYNCEKMI 254
RLRGG IEPSLR LA KYNC+K I
Sbjct: 72 RLRGGIIEPSLRQLAQKYNCDKQI 95
Score = 54.8 bits (126), Expect = 3e-08
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 254 CRKCYARLHPRATNCRKTKCGHTNNLR 334
CRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 96 CRKCYARLPPRASNCRKKKCGHSSELR 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 135 bits (327), Expect = 1e-32
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 772 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 831
Query: 183 RLRGGTI 203
RLRGG I
Sbjct: 832 RLRGGDI 838
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 88 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 164 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 240 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 316 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 375
Query: 183 RLRGG 197
RLRGG
Sbjct: 376 RLRGG 380
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 392 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 451
Query: 183 RLRGG 197
RLRGG
Sbjct: 452 RLRGG 456
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 468 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 527
Query: 183 RLRGG 197
RLRGG
Sbjct: 528 RLRGG 532
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 544 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 603
Query: 183 RLRGG 197
RLRGG
Sbjct: 604 RLRGG 608
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 620 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 679
Query: 183 RLRGG 197
RLRGG
Sbjct: 680 RLRGG 684
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 696 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 755
Query: 183 RLRGG 197
RLRGG
Sbjct: 756 RLRGG 760
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 88 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 164 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 240 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 316 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 375
Query: 183 RLRGG 197
RLRGG
Sbjct: 376 RLRGG 380
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 392 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 451
Query: 183 RLRGG 197
RLRGG
Sbjct: 452 RLRGG 456
Score = 75.8 bits (178), Expect = 1e-14
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 110
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 468 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 88 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 164 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 240 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 316 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 375
Query: 183 RLRGG 197
RLRGG
Sbjct: 376 RLRGG 380
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 392 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 451
Query: 183 RLRGG 197
RLRGG
Sbjct: 452 RLRGG 456
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 468 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 527
Query: 183 RLRGG 197
RLRGG
Sbjct: 528 RLRGG 532
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 544 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 603
Query: 183 RLRGG 197
RLRGG
Sbjct: 604 RLRGG 608
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 620 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 679
Query: 183 RLRGG 197
RLRGG
Sbjct: 680 RLRGG 684
Score = 134 bits (324), Expect = 3e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
Sbjct: 696 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 755
Query: 183 RLRGG 197
RLRGG
Sbjct: 756 RLRGG 760
Score = 134 bits (324), Expect = 3e-32
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK+STLHLVL
Sbjct: 772 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVL 831
Query: 183 RLRGGTI 203
RLRGG I
Sbjct: 832 RLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 85.8 bits (203), Expect = 1e-17
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLVL
Sbjct: 13 IELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLA 72
Query: 186 LRGG 197
LRGG
Sbjct: 73 LRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 73.7 bits (173), Expect = 6e-14
Identities = 33/63 (52%), Positives = 45/63 (71%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 172 TIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVS 231
Query: 183 RLR 191
R R
Sbjct: 232 RHR 234
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
+ VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 103 ITVEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++ L
Sbjct: 10 TLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNL 65
Query: 183 RLRGG 197
L GG
Sbjct: 66 ELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E+T+++ L
Sbjct: 10 TLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNL 65
Query: 183 RLRGG 197
L GG
Sbjct: 66 ELLGG 70
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIP 80
TITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +3
Query: 15 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
++ DT+ ++K I+ + IP L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 168 KIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 43.2 bits (97), Expect = 9e-05
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLSDYNIQKESTLH 173
T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D + + STL
Sbjct: 113 TCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLR 172
Query: 174 L 176
L
Sbjct: 173 L 173
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/55 (43%), Positives = 29/55 (52%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
L V SDTI VK I + R++ K LED TL+ YNIQ+ STL L
Sbjct: 187 LWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 191
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/64 (25%), Positives = 38/64 (59%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
+ ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++
Sbjct: 589 VQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVK 648
Query: 186 LRGG 197
RGG
Sbjct: 649 ERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/64 (25%), Positives = 38/64 (59%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
+ ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L ++
Sbjct: 589 VQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVK 648
Query: 186 LRGG 197
RGG
Sbjct: 649 ERGG 652
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 170
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
T TL V ASDT+E K ++ R+ + GK L D T +YNI ST+ L
Sbjct: 53 TRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISNNSTMDLHF 108
Query: 183 RL 188
R+
Sbjct: 109 RI 110
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 113
T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 10 TLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 32.3 bits (70), Expect = 0.17
Identities = 13/58 (22%), Positives = 30/58 (51%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 179
+TL + + IE++ ++ IP D+ ++F GK+L + D ++ + + L+
Sbjct: 20 LTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPATQIMLL 77
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.23
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +3
Query: 30 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
+++E +K KI+ + GIP + L GK L D + L+DY + ++++ L++R
Sbjct: 163 ESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTSVELLVR 212
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 170
I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 194 IPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 254 CRKCYARLHPRATNCRKTKCGHT 322
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 188
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 189 RGGTI 203
+ T+
Sbjct: 160 KLSTL 164
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 69 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 221
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 69 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 221
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 69 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 221
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical
protein T28C6.3 protein.
Length = 200
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 287 HEDEDGHSIYGNHFLTVILHGENAKGRFNCT-SSKSQNQVKCGFFLDVIV 141
+EDE+G SI LT+ + N+K N T +S+S N + C L + +
Sbjct: 135 YEDEEGKSIIEKEALTISPNSCNSKHTRNVTKTSQSFNVLVCILVLGLYI 184
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 111 KQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 233
K ++D R L DY+ K ++L L +I+P LR L +K
Sbjct: 1173 KMIDDIRGLLDYDTAKIGQINLALYHFSDSIQPVLRRLDIK 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,197,827
Number of Sequences: 27780
Number of extensions: 209588
Number of successful extensions: 550
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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