Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1150
(460 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 155 1e-38
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 155 1e-38
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 133 6e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 133 6e-32
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 131 3e-31
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 131 3e-31
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 131 3e-31
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 130 3e-31
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 130 3e-31
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 130 3e-31
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 130 3e-31
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 130 3e-31
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 130 3e-31
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 130 3e-31
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 130 3e-31
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 130 3e-31
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 130 3e-31
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 130 3e-31
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 130 3e-31
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 130 3e-31
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 129 8e-31
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 129 1e-30
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 118 1e-27
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 100 9e-22
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 82 2e-16
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 58 2e-09
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 55 3e-08
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 53 1e-07
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 50 6e-07
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 50 6e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 49 2e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 48 3e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 45 2e-05
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 45 2e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 44 5e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 42 2e-04
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 42 2e-04
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 42 3e-04
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 40 6e-04
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 40 8e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.001
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 38 0.004
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 37 0.006
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.010
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 36 0.010
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 36 0.017
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 36 0.017
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 36 0.017
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 35 0.023
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 35 0.030
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 35 0.030
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 34 0.040
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 34 0.040
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 32 0.21
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 31 0.49
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 30 0.65
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 30 0.65
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.65
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 29 2.0
At1g47680.1 68414.m05297 hypothetical protein 29 2.0
At3g54530.1 68416.m06034 hypothetical protein 28 3.5
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 4.6
At2g19180.1 68415.m02238 expressed protein 27 4.6
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 27 4.6
At1g14560.1 68414.m01731 mitochondrial substrate carrier family ... 27 8.1
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 155 bits (376), Expect = 1e-38
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGGTIEPSLRILAMKYNCEKMI 254
RLRGG IEPSL +LA KYN +KMI
Sbjct: 72 RLRGGIIEPSLMMLARKYNQDKMI 95
Score = 63.3 bits (147), Expect = 8e-11
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 254 CRKCYARLHPRATNCRKTKCGHTNNLRP 337
CRKCYARLHPRA NCRK KCGH+N LRP
Sbjct: 96 CRKCYARLHPRAVNCRKKKCGHSNQLRP 123
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 155 bits (376), Expect = 1e-38
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGGTIEPSLRILAMKYNCEKMI 254
RLRGG IEPSL +LA KYN +KMI
Sbjct: 72 RLRGGIIEPSLMMLARKYNQDKMI 95
Score = 63.3 bits (147), Expect = 8e-11
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 254 CRKCYARLHPRATNCRKTKCGHTNNLRP 337
CRKCYARLHPRA NCRK KCGH+N LRP
Sbjct: 96 CRKCYARLHPRAVNCRKKKCGHSNQLRP 123
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 133 bits (321), Expect = 6e-32
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGGTI 203
RLRGGT+
Sbjct: 72 RLRGGTM 78
Score = 85.0 bits (201), Expect = 2e-17
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL
Sbjct: 89 IEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLA 148
Query: 186 LRGGTI 203
LRGG +
Sbjct: 149 LRGGLL 154
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 133 bits (321), Expect = 6e-32
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGGTI 203
RLRGGT+
Sbjct: 72 RLRGGTM 78
Score = 87.8 bits (208), Expect = 3e-18
Identities = 38/64 (59%), Positives = 51/64 (79%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL
Sbjct: 89 IEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLA 148
Query: 186 LRGG 197
LRGG
Sbjct: 149 LRGG 152
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 131 bits (316), Expect = 3e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 375
Query: 183 RLRGGT 200
RLRGG+
Sbjct: 376 RLRGGS 381
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 131 bits (316), Expect = 3e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGGT 200
RLRGG+
Sbjct: 300 RLRGGS 305
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 131 bits (316), Expect = 3e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGGT 200
RLRGG+
Sbjct: 300 RLRGGS 305
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKE 71
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 73 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 177
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 375
Query: 183 RLRGG 197
RLRGG
Sbjct: 376 RLRGG 380
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKE 71
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 392 TITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 73 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 177
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKE 71
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 73 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 177
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 375
Query: 183 RLRGG 197
RLRGG
Sbjct: 376 RLRGG 380
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKE 71
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 392 TITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 73 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 177
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKE 71
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 73 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 177
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGG 197
RLRGG
Sbjct: 224 RLRGG 228
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 183 RLRGG 197
RLRGG
Sbjct: 300 RLRGG 304
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
Score = 127 bits (307), Expect = 3e-30
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 163 TITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 222
Query: 183 RLRGG 197
RLRGG
Sbjct: 223 RLRGG 227
Score = 123 bits (297), Expect = 5e-29
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVL 146
Query: 183 RLRGG 197
RLRGG
Sbjct: 147 RLRGG 151
Score = 80.2 bits (189), Expect = 6e-16
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 128
TITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 239 TITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 130 bits (315), Expect = 3e-31
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 12 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71
Query: 183 RLRGG 197
RLRGG
Sbjct: 72 RLRGG 76
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 129 bits (312), Expect = 8e-31
Identities = 61/65 (93%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 88 TITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147
Query: 183 RLRGG 197
RLRGG
Sbjct: 148 RLRGG 152
Score = 125 bits (301), Expect = 2e-29
Identities = 60/66 (90%), Positives = 64/66 (96%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYNIQKESTLHLVL
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVL 223
Query: 183 RLRGGT 200
RLRGG+
Sbjct: 224 RLRGGS 229
Score = 114 bits (275), Expect = 2e-26
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
T LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN+Q++STLHL+L
Sbjct: 12 TKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLL 71
Query: 183 RLRGG 197
R RGG
Sbjct: 72 RFRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 129 bits (311), Expect = 1e-30
Identities = 60/65 (92%), Positives = 65/65 (100%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVL
Sbjct: 90 TITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVL 149
Query: 183 RLRGG 197
RLRGG
Sbjct: 150 RLRGG 154
Score = 123 bits (297), Expect = 5e-29
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 166 TIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 225
Query: 183 RLRGG 197
RL GG
Sbjct: 226 RLCGG 230
Score = 115 bits (277), Expect = 1e-26
Identities = 58/66 (87%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLV 179
TITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DYNIQKESTLHLV
Sbjct: 242 TITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLV 301
Query: 180 LRLRGG 197
LRLRGG
Sbjct: 302 LRLRGG 307
Score = 105 bits (252), Expect = 1e-23
Identities = 50/65 (76%), Positives = 58/65 (89%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+IQK+S LHL L
Sbjct: 14 TITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLAL 73
Query: 183 RLRGG 197
RLRGG
Sbjct: 74 RLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 118 bits (285), Expect = 1e-27
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEV++SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVL
Sbjct: 90 TITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 149
Query: 183 RLRGG 197
RL GG
Sbjct: 150 RLCGG 154
Score = 118 bits (283), Expect = 3e-27
Identities = 57/65 (87%), Positives = 61/65 (93%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYNIQKESTLHLVL
Sbjct: 14 TITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVL 73
Query: 183 RLRGG 197
RLRGG
Sbjct: 74 RLRGG 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 48/63 (76%), Positives = 53/63 (84%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+I K+STL+LVL
Sbjct: 563 TIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVL 622
Query: 183 RLR 191
RLR
Sbjct: 623 RLR 625
Score = 94.3 bits (224), Expect = 4e-20
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL
Sbjct: 405 ITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFH 464
Query: 186 LRGG 197
+R G
Sbjct: 465 IRHG 468
Score = 92.7 bits (220), Expect = 1e-19
Identities = 46/66 (69%), Positives = 55/66 (83%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDGRTLSDYNIQKESTLHL 176
T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L ED RTL+DY I+ STL L
Sbjct: 171 TLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCL 230
Query: 177 VLRLRG 194
LRLRG
Sbjct: 231 ALRLRG 236
Score = 92.3 bits (219), Expect = 1e-19
Identities = 46/62 (74%), Positives = 51/62 (82%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 191
LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R
Sbjct: 257 LEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFR 316
Query: 192 GG 197
G
Sbjct: 317 CG 318
Score = 89.0 bits (211), Expect = 1e-18
Identities = 45/64 (70%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSDYNIQKESTLHLV 179
I LEVE+ DTIENVKA +QDKEGI P QRLIF GK+L+DG TL+DY+IQKESTLHLV
Sbjct: 331 INLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLV 390
Query: 180 LRLR 191
L ++
Sbjct: 391 LGMQ 394
Score = 89.0 bits (211), Expect = 1e-18
Identities = 44/65 (67%), Positives = 50/65 (76%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H +
Sbjct: 487 TITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLF 546
Query: 183 RLRGG 197
RGG
Sbjct: 547 LQRGG 551
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 99.5 bits (237), Expect = 9e-22
Identities = 47/61 (77%), Positives = 52/61 (85%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+ R
Sbjct: 98 IVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKR 157
Query: 186 L 188
L
Sbjct: 158 L 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/64 (54%), Positives = 48/64 (75%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL
Sbjct: 13 IDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLA 72
Query: 186 LRGG 197
LRGG
Sbjct: 73 LRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+++ TLHL++
Sbjct: 35 TYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIV 94
Query: 183 R 185
R
Sbjct: 95 R 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 170
T LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYNI+ ++ L
Sbjct: 152 TFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 51.2 bits (117), Expect = 3e-07
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSD 143
T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+ ++ D D
Sbjct: 61 TNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTID 120
Query: 144 YNIQKESTLHLVLRL 188
I E T LVLRL
Sbjct: 121 LKINGEPTRQLVLRL 135
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
TI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV
Sbjct: 107 TIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVA 166
Query: 183 RLR 191
R++
Sbjct: 167 RMQ 169
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 50.4 bits (115), Expect = 6e-07
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 182
I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + + LHLVL
Sbjct: 46 IPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVL 105
Query: 183 RLRGGTIEPSLRILAMKYNCEK 248
+L L++L +K C K
Sbjct: 106 KL------SDLQVLDVKTTCGK 121
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 18 VEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
VE I VK +I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 127 VERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 50.4 bits (115), Expect = 6e-07
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVL 182
I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + + LHLVL
Sbjct: 46 IPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVL 105
Query: 183 RLRGGTIEPSLRILAMKYNCEK 248
+L L++L +K C K
Sbjct: 106 KL------SDLQVLDVKTTCGK 121
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 18 VEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
VE I VK +I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 127 VERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +3
Query: 9 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 179
+++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 31 SVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +3
Query: 33 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 179
T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 39 TVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 45.2 bits (102), Expect = 2e-05
Identities = 18/59 (30%), Positives = 39/59 (66%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS ++ + L +++
Sbjct: 13 ITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGVKDDDLLMMMV 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLV 179
T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S LHLV
Sbjct: 45 TMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLV 104
Query: 180 LRL 188
L+L
Sbjct: 105 LKL 107
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 18 VEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 185
V+ + +K +I ++ +G P D Q ++F G++L+D R + S +HL+++
Sbjct: 127 VDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHLLVK 184
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 179
T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 22 THTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +3
Query: 39 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 197
E +K +I ++ IP QRLI G Q+ DG +S Q ++T++LVL LRGG
Sbjct: 33 EQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGG 81
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLSDYNIQKESTLHLVL 182
+EVE + TI ++K KI D G+ Q L GK ++ G T+ DY I+ H+
Sbjct: 15 VEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDIFHMSD 74
Query: 183 RLRGG 197
R+RGG
Sbjct: 75 RMRGG 79
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
T ++++ DT+ K KI+ + IP +Q + F GK LED + +++I + LHL
Sbjct: 12 TFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 40.3 bits (90), Expect = 6e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
+ ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY I ES L L
Sbjct: 12 SFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 170
+ ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY I ES L
Sbjct: 12 SFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 6 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVL 182
I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY + LHLV+
Sbjct: 44 IPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVI 103
Query: 183 RL 188
RL
Sbjct: 104 RL 105
Score = 33.9 bits (74), Expect = 0.053
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
L VE S + VK +I KE GIP D + L G++L+D R ++D ++ +HL++
Sbjct: 123 LVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQNGDNVIHLLI 181
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 37.5 bits (83), Expect = 0.004
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 39 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT--IEPS 212
E +K +I ++ IP QRLI G Q+ +S Q ++T++LVL LRGG +
Sbjct: 33 EQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNLVLSLRGGKGGLGSL 88
Query: 213 LRILAMKYNCEK 248
LR + MK +K
Sbjct: 89 LRNVVMKAGQKK 100
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 179
L V +++ ++KAK K + ++ + GK+LED ++L++ N+Q S +HL+
Sbjct: 514 LTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNSLVHLL 570
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.010
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 125
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 36.3 bits (80), Expect = 0.010
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 27 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 197
S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 35.5 bits (78), Expect = 0.017
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
+ V SDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 35.5 bits (78), Expect = 0.017
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
+ V SDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 35.5 bits (78), Expect = 0.017
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 182
+ V SDTI VK I+D +G P QQ LI GK L+D +L + + +E L ++L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML 74
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 35.1 bits (77), Expect = 0.023
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +3
Query: 12 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 176
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSK--- 70
Query: 177 VLRLRGGTIEPSLRILAMKYNCEKMIAVNA 266
+L R E I+A + ++ V A
Sbjct: 71 ILSCRQAAPEEGKSIMAEEERARRLSRVKA 100
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 34.7 bits (76), Expect = 0.030
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
+ T++V DT+ +K KI+ +G P +Q LIF K L+D + I+ S + L
Sbjct: 13 SFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 34.7 bits (76), Expect = 0.030
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
+ T++V DT+ +K KI+ +G P +Q LIF K L+D + I+ S + L
Sbjct: 47 SFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 104
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 34.3 bits (75), Expect = 0.040
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 3 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
T +E+ DT+ +K KI+ + IP +Q L+F G L+D + I S + L
Sbjct: 12 TFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNHSRIQL 69
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 34.3 bits (75), Expect = 0.040
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 179
L V +++ +++AK K + ++ + GK+L+D ++L+ N+Q S +HL+
Sbjct: 675 LHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 125
+ ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 93 ISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 30.7 bits (66), Expect = 0.49
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Frame = +3
Query: 24 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 203
A+ ++E VK IQD + P++ L+ + L GR L + + +H+V R I
Sbjct: 50 AASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEI 106
Query: 204 E--------------PSLRILAMKYNCEKMIAVNAMPVFILVLPTVARQSADTLTI 329
P ++++ Y CEK+ VN M F ++L R+SA L I
Sbjct: 107 AGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEM-YFSIILD---RKSAGPLII 158
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 30.3 bits (65), Expect = 0.65
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 110
+EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 15 IEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 30.3 bits (65), Expect = 0.65
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 125
+E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 15 IELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.65
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 27 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 167
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 168 LHLVLRL 188
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 12 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 110
LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 15 LEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 21 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 176
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At3g54530.1 68416.m06034 hypothetical protein
Length = 273
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2
Query: 318 CPHFVLRQLVARG*RRA*HLRQSFSHSYTSWRECEGKVQLYLL*VSKPG 172
CP R A +R L Q + H+Y + E + +Y + +PG
Sbjct: 43 CPGSFGRSSFAEAKKRLEKLEQDYQHTYEKYTELQSDRYMYYIAFQRPG 91
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 104 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 12
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 386 YNKFPIWLLFNP*SSFWV 333
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 104 CRETIRRWPHSFRL*HPERIHTSPGFE 184
C+ETI+ W H+ + + H PG E
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGME 473
>At1g14560.1 68414.m01731 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 331
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1
Query: 418 VSFACYENSIVTINFPFGYYLILDLLFGSQIVSVSALCLATVGSTRMK 275
+++ Y + I+ N P G I+DL+ GS + LC + R K
Sbjct: 99 MTYEVYRDWILEKNLPLGSGPIVDLVAGSAAGGTAVLCTYPLDLARTK 146
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,597,050
Number of Sequences: 28952
Number of extensions: 194194
Number of successful extensions: 634
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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