Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1148
(341 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock p... 55 6e-10
AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A... 24 1.4
CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein ... 23 2.4
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 2.4
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 2.4
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 2.4
DQ396550-1|ABD60145.1| 113|Anopheles gambiae adipokinetic hormo... 22 5.5
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 22 5.5
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 22 5.5
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 22 5.5
AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 22 7.2
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 22 7.2
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 21 9.6
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 21 9.6
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 21 9.6
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 21 9.6
>AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock
protein protein.
Length = 133
Score = 55.2 bits (127), Expect = 6e-10
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 RRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKN-ERAVPITQTGPVRKEIKEPTAE 178
RRY LP+ N + S LSSDG+LT+ PR KN ER++PIT TG K++ A
Sbjct: 60 RRYMLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAP 119
Query: 179 VESNETKQ 202
+ K+
Sbjct: 120 ENGHSKKE 127
>AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A
protein.
Length = 433
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 148 PEGD*GAHCGS*EQRNK 198
P GD GAHCG+ + N+
Sbjct: 321 PYGDTGAHCGNHQDLNE 337
>CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein
protein.
Length = 277
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 254 NKINTRYTFLIHSVPRVIVLFRCSQLPQWAP*SPSGPGRF 135
N+ N RYTFL+ + C Q+ + + P GP R+
Sbjct: 161 NRPNVRYTFLLRQLNHGGDHAECGQVERKS--QPFGPARW 198
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 85 SQDSGCHEERASCSHHSNRPGPEGD*GAHCG 177
S D G AS S ++ P P G G H G
Sbjct: 1401 STDGGESMGTASTSSQTDEPRPGGSGGGHTG 1431
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 23.4 bits (48), Expect = 2.4
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = -2
Query: 190 VALNFRSGLLNLLPDRAGLSDGNSSLVLRGSRSPGSDHGQHAVRGQPRFDSVGVTVFWQS 11
VA NF L+P GN L+LR + + + V F +G+ V +
Sbjct: 1035 VAANFSEVFKKLVPQ------GNGHLILRTTNDQEGNDMEREVETSDEFTGIGIRVSFTQ 1088
Query: 10 V 8
V
Sbjct: 1089 V 1089
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 121 SSLVLRGSRSPGSDHGQHAVRGQPRFDSVG 32
SS SR GSD G H++ + D G
Sbjct: 1345 SSKFSTSSRGSGSDSGSHSISSAAQHDFQG 1374
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 124 SHHSNRPGPEGD*GAHCGS*EQRNKTMTLGT 216
S S PGPEG G S ++ TLGT
Sbjct: 1410 SGRSKPPGPEGVGGGGGKSPSDKHNPGTLGT 1440
>DQ396550-1|ABD60145.1| 113|Anopheles gambiae adipokinetic hormone
II protein.
Length = 113
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 98 AATKNERAVPITQTGPVRKEIKEPTAEVESN 190
A TKN + + + +T + K ++ A +ESN
Sbjct: 70 AVTKNIQHLTLCETRSLLKSLQTDEASMESN 100
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -1
Query: 308 IKYKYDKAISLTSTHEECNKINTRYTFLIHSVPRVIV 198
++Y+YD L + + NTRY + + R +V
Sbjct: 1880 MRYEYDNQSGLLTLKRTPDAGNTRYMYTPEGLLRFVV 1916
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 22.2 bits (45), Expect = 5.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -1
Query: 308 IKYKYDKAISLTSTHEECNKINTRYTFLIHSVPRVIV 198
++Y+YD L + + NTRY + + R +V
Sbjct: 1881 MRYEYDNQSGLLTLKRTPDAGNTRYMYTPEGLLRFVV 1917
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = -1
Query: 116 ARSSWQPESWERSRS 72
A +SW P WE ++
Sbjct: 2709 ANNSWNPAKWELKKA 2723
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +1
Query: 100 CHEERASCSHHSNRPGPEGD*GAHC 174
CHEE CS ++ G G C
Sbjct: 465 CHEEGMECSEQCSKAGCWGKGPEQC 489
>AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR
protein.
Length = 640
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -2
Query: 220 TAFRESLFCFVALNFRSGLLNLLPDRAGL 134
+ + ++C++ FRSG + +L GL
Sbjct: 560 SCYNPIIYCYMNARFRSGFILVLHGVPGL 588
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -2
Query: 130 DGNSSLV--LRGSRSPGSDHGQHAVRG 56
+ NS L L + PGS++GQ ++G
Sbjct: 25 ESNSDLYGPLHANYGPGSNNGQEGLKG 51
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 169 GLLNLLPDRAGLSDGNSSLVLRGSRSPGSDHGQH 68
G + +P +G S NSS ++ S + DH H
Sbjct: 877 GFVFSVPFNSGYSGKNSSTLVTASHAIFIDHRGH 910
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = -2
Query: 154 LPDRAGLSDGNSSLVLRGSRSPGSDHGQHAVRGQP 50
LP + G L+G P + G+ + GQP
Sbjct: 360 LPGQKGDRGSEGLHGLKGQSGPKGEPGRDGIPGQP 394
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 101 QPESWERSRSARRQRTA 51
QP +++ +ARRQRTA
Sbjct: 215 QPPREQQTGTARRQRTA 231
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 122 VPITQTGPVRKEIKEPTAEVESNE 193
VP E EPT EVE E
Sbjct: 1078 VPAVLARAAANEAAEPTGEVEEEE 1101
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,239
Number of Sequences: 2352
Number of extensions: 6269
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -