Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1148
         (341 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   1.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   1.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   1.0  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   5.4  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   5.4  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   5.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 193 FVALNFRSGLLNLLPDRAGLSDGNSSL 113
           FV +N+R G+L  L     +  GN  L
Sbjct: 153 FVTINYRLGILGFLSTEDEVVPGNMGL 179


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 193 FVALNFRSGLLNLLPDRAGLSDGNSSL 113
           FV +N+R G+L  L     +  GN  L
Sbjct: 24  FVTINYRLGILGFLSTEDEVVPGNMGL 50


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 193 FVALNFRSGLLNLLPDRAGLSDGNSSL 113
           FV +N+R G+L  L     +  GN  L
Sbjct: 153 FVTINYRLGILGFLSTEDEVVPGNMGL 179


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 156 RLRSPLRKLRATKQNNDSRNAVNQKSVACVNF 251
           R +S   K+ ++  NN + N  N K + C N+
Sbjct: 73  REKSKEHKIISSLSNNYNYNNNNYKKLYCNNY 104


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 156 RLRSPLRKLRATKQNNDSRNAVNQKSVACVNF 251
           R +S   K+ ++  NN + N  N K + C N+
Sbjct: 73  REKSKEHKIISSLSNNYNYNNNNYKKLYCNNY 104


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 156 RLRSPLRKLRATKQNNDSRNAVNQKSVACVNF 251
           R +S   K+ ++  NN + N  N K + C N+
Sbjct: 73  REKSKEHKIISSLSNNYNYNNNNYKKLYCNNY 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,509
Number of Sequences: 438
Number of extensions: 1817
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)