Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1144
(675 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 126 4e-29
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 124 1e-28
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 124 1e-28
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 124 1e-28
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 124 1e-28
AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p pro... 30 3.3
AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-P... 30 3.3
BT001630-1|AAN71385.1| 642|Drosophila melanogaster RE38276p pro... 29 7.7
AE014297-2311|AAF55388.1| 642|Drosophila melanogaster CG5169-PA... 29 7.7
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 126 bits (303), Expect = 4e-29
Identities = 58/87 (66%), Positives = 67/87 (77%)
Frame = +1
Query: 250 QNGKHGHAKFTWLGLISSMVKSMXYICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADN 429
+ GKHGHAK +G+ K ICPSTHNMDVP+VKRED QL ISDD +LTLM D+
Sbjct: 48 KTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDS 107
Query: 430 GDLREDLKIPDGDLGTQLRTDFDSGKD 510
GDLREDLK+P+G+LG QLR DFDSGKD
Sbjct: 108 GDLREDLKVPEGELGEQLRLDFDSGKD 134
Score = 89.0 bits (211), Expect = 5e-18
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 107 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKT 256
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKT
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKT 49
Score = 52.8 bits (121), Expect = 4e-07
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Frame = +3
Query: 276 IHLVGIDIFNGKKYXXYL-SLHTQH-GRTSREARRL---PTD*YLG*WLPDPDG*QR*PA 440
+H+VGIDIF+ KKY S H RE +L D +L L G R
Sbjct: 57 VHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLT--LMTDSGDLREDL 114
Query: 441 *GPQNPGW*PRHTVAY*LRQRQGLLCTVLKSCGEECVIAVKANTALDK 584
P+ + + LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 115 KVPEGE---LGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 124 bits (299), Expect = 1e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +1
Query: 250 QNGKHGHAKFTWLGLISSMVKSMXYICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADN 429
+ GKHGHAK +G+ K ICPSTHNMDVP+VKRED QL ISDD +LTLM ++
Sbjct: 48 KTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTES 107
Query: 430 GDLREDLKIPDGDLGTQLRTDFDSGKD 510
GDLREDLK+P+G+LG QLR DFDSGKD
Sbjct: 108 GDLREDLKVPEGELGEQLRLDFDSGKD 134
Score = 85.8 bits (203), Expect = 5e-17
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +2
Query: 107 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKT 256
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKT
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKT 49
Score = 52.8 bits (121), Expect = 4e-07
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Frame = +3
Query: 276 IHLVGIDIFNGKKYXXYL-SLHTQH-GRTSREARRL---PTD*YLG*WLPDPDG*QR*PA 440
+H+VGIDIF+ KKY S H RE +L D +L L G R
Sbjct: 57 VHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLT--LMTESGDLREDL 114
Query: 441 *GPQNPGW*PRHTVAY*LRQRQGLLCTVLKSCGEECVIAVKANTALDK 584
P+ + + LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 115 KVPEGE---LGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 124 bits (299), Expect = 1e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +1
Query: 250 QNGKHGHAKFTWLGLISSMVKSMXYICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADN 429
+ GKHGHAK +G+ K ICPSTHNMDVP+VKRED QL ISDD +LTLM ++
Sbjct: 48 KTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTES 107
Query: 430 GDLREDLKIPDGDLGTQLRTDFDSGKD 510
GDLREDLK+P+G+LG QLR DFDSGKD
Sbjct: 108 GDLREDLKVPEGELGEQLRLDFDSGKD 134
Score = 89.0 bits (211), Expect = 5e-18
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 107 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKT 256
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKT
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKT 49
Score = 52.8 bits (121), Expect = 4e-07
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Frame = +3
Query: 276 IHLVGIDIFNGKKYXXYL-SLHTQH-GRTSREARRL---PTD*YLG*WLPDPDG*QR*PA 440
+H+VGIDIF+ KKY S H RE +L D +L L G R
Sbjct: 57 VHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLT--LMTESGDLREDL 114
Query: 441 *GPQNPGW*PRHTVAY*LRQRQGLLCTVLKSCGEECVIAVKANTALDK 584
P+ + + LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 115 KVPEGE---LGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 124 bits (299), Expect = 1e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +1
Query: 250 QNGKHGHAKFTWLGLISSMVKSMXYICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADN 429
+ GKHGHAK +G+ K ICPSTHNMDVP+VKRED QL ISDD +LTLM ++
Sbjct: 48 KTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTES 107
Query: 430 GDLREDLKIPDGDLGTQLRTDFDSGKD 510
GDLREDLK+P+G+LG QLR DFDSGKD
Sbjct: 108 GDLREDLKVPEGELGEQLRLDFDSGKD 134
Score = 85.8 bits (203), Expect = 5e-17
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +2
Query: 107 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKT 256
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKT
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKT 49
Score = 52.8 bits (121), Expect = 4e-07
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Frame = +3
Query: 276 IHLVGIDIFNGKKYXXYL-SLHTQH-GRTSREARRL---PTD*YLG*WLPDPDG*QR*PA 440
+H+VGIDIF+ KKY S H RE +L D +L L G R
Sbjct: 57 VHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLT--LMTESGDLREDL 114
Query: 441 *GPQNPGW*PRHTVAY*LRQRQGLLCTVLKSCGEECVIAVKANTALDK 584
P+ + + LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 115 KVPEGE---LGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 124 bits (299), Expect = 1e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +1
Query: 250 QNGKHGHAKFTWLGLISSMVKSMXYICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADN 429
+ GKHGHAK +G+ K ICPSTHNMDVP+VKRED QL ISDD +LTLM ++
Sbjct: 48 KTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTES 107
Query: 430 GDLREDLKIPDGDLGTQLRTDFDSGKD 510
GDLREDLK+P+G+LG QLR DFDSGKD
Sbjct: 108 GDLREDLKVPEGELGEQLRLDFDSGKD 134
Score = 85.8 bits (203), Expect = 5e-17
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +2
Query: 107 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKT 256
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKT
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKT 49
Score = 52.8 bits (121), Expect = 4e-07
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Frame = +3
Query: 276 IHLVGIDIFNGKKYXXYL-SLHTQH-GRTSREARRL---PTD*YLG*WLPDPDG*QR*PA 440
+H+VGIDIF+ KKY S H RE +L D +L L G R
Sbjct: 57 VHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLT--LMTESGDLREDL 114
Query: 441 *GPQNPGW*PRHTVAY*LRQRQGLLCTVLKSCGEECVIAVKANTALDK 584
P+ + + LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 115 KVPEGE---LGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p
protein.
Length = 709
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 288 QPSEFSVAV-LSVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSM 115
QP++ + V + D+S +LH P S T L + + + A AP SP S+C SS
Sbjct: 541 QPAQEKLYVDIPAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQ 599
Query: 114 SPI 106
SP+
Sbjct: 600 SPM 602
>AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-PA
protein.
Length = 709
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 288 QPSEFSVAV-LSVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSM 115
QP++ + V + D+S +LH P S T L + + + A AP SP S+C SS
Sbjct: 541 QPAQEKLYVDIPAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQ 599
Query: 114 SPI 106
SP+
Sbjct: 600 SPM 602
>BT001630-1|AAN71385.1| 642|Drosophila melanogaster RE38276p
protein.
Length = 642
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -3
Query: 418 SGSGSHHPRYQSVGSLRASREVRPCCVWRDRYXSYFLPLKISIPT 284
S S R S LR SR P DR S LPL+ S+PT
Sbjct: 444 SASELQQKRSSSKPELRQSRSAAPLDQVEDRRASLGLPLQSSVPT 488
>AE014297-2311|AAF55388.1| 642|Drosophila melanogaster CG5169-PA
protein.
Length = 642
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -3
Query: 418 SGSGSHHPRYQSVGSLRASREVRPCCVWRDRYXSYFLPLKISIPT 284
S S R S LR SR P DR S LPL+ S+PT
Sbjct: 444 SASELQQKRSSSKPELRQSRSAAPLDQVEDRRASLGLPLQSSVPT 488
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,410,441
Number of Sequences: 53049
Number of extensions: 648392
Number of successful extensions: 2167
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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