Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1142
(737 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 28 0.090
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 28 0.090
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 28 0.090
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 26 0.37
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 24 1.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 1.5
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 24 1.5
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 23 3.4
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 23 3.4
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 5.9
AM712902-1|CAN84641.1| 95|Tribolium castaneum hypothetical pro... 22 5.9
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 7.9
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.9
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 21 7.9
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 27.9 bits (59), Expect = 0.090
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 591 RARAAKSDE-DDGDDAPEPTDTANNDLDSSDDE 686
R A SDE DDGDD + NND D D+E
Sbjct: 174 RLEDANSDEQDDGDDG--QGSSTNNDEDDDDEE 204
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 27.9 bits (59), Expect = 0.090
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 591 RARAAKSDE-DDGDDAPEPTDTANNDLDSSDDE 686
R A SDE DDGDD + NND D D+E
Sbjct: 174 RLEDANSDEQDDGDDG--QGSSTNNDEDDDDEE 204
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 27.9 bits (59), Expect = 0.090
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 591 RARAAKSDE-DDGDDAPEPTDTANNDLDSSDDE 686
R A SDE DDGDD + NND D D+E
Sbjct: 174 RLEDANSDEQDDGDDG--QGSSTNNDEDDDDEE 204
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 25.8 bits (54), Expect = 0.37
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +3
Query: 528 VVRKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+V+KH++ G +K+R + DE + + E + + D +D +ED+D
Sbjct: 199 IVKKHSQFI-GYPIKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDED 257
Query: 708 NTAAKIRNKR 737
+ K+
Sbjct: 258 TKKEDKKKKK 267
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +3
Query: 600 AAKSDEDDGDDAPEPTDTANNDLDSSD---DEAPNEDDDNTA 716
A ++DD PE D + D+D D AP D A
Sbjct: 224 AGSLEDDDNISDPEDDDDKDQDMDEGDLPLPAAPGGDSQQAA 265
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 455 LYCLWGKNVNFMVVFSCLSGL 393
L+CLWGK VF+C GL
Sbjct: 1295 LHCLWGK----YEVFNCAPGL 1311
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.8 bits (49), Expect = 1.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -2
Query: 142 GSPIDWAASNPTGSPGEAIDSKN 74
G +DW ++NP + + +KN
Sbjct: 97 GEYVDWCSTNPCENQATCVQNKN 119
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 431 VNFMVVFSCLSGLTT 387
+N+ +VFS L G+TT
Sbjct: 630 INYTLVFSILGGVTT 644
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 431 VNFMVVFSCLSGLTT 387
+N+ +VFS L G+TT
Sbjct: 355 INYTLVFSILGGVTT 369
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 63 MNAKFLESMASPGEPVGLLAAQ 128
MN K E + G P+ +LAAQ
Sbjct: 22 MNVKAAEHPSLRGTPLAMLAAQ 43
>AM712902-1|CAN84641.1| 95|Tribolium castaneum hypothetical
protein protein.
Length = 95
Score = 21.8 bits (44), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 580 CSEAHITPHV 551
C E H++PHV
Sbjct: 36 CDEKHVSPHV 45
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 502 NKSSMKCLRWCGSTPRPR 555
N + CLR C S RP+
Sbjct: 186 NGNKCCCLRTCSSAKRPK 203
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -2
Query: 556 HVALACFRTTVNISSKIYFACVL*FASASQ 467
++ C+ T + +KIYF ++ F S+
Sbjct: 1011 YICHVCYATIQEVRAKIYFFYLVKFYKVSK 1040
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -2
Query: 556 HVALACFRTTVNISSKIYFACVL*FASASQ 467
++ C+ T + +KIYF ++ F S+
Sbjct: 292 YICHVCYATIQEVRAKIYFFYLVKFYKVSK 321
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,637
Number of Sequences: 336
Number of extensions: 3203
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -