Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1142
(737 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57660.1 68416.m06424 DNA-directed RNA polymerase family prot... 65 4e-11
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 56 2e-08
At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative s... 45 5e-05
At1g48400.1 68414.m05406 F-box family protein contains F-box dom... 36 0.028
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 36 0.037
At2g21420.1 68415.m02549 zinc finger protein-related contains lo... 36 0.037
At5g63740.1 68418.m08000 zinc finger protein-related 35 0.049
At5g07170.1 68418.m00817 hypothetical protein 35 0.049
At3g59020.1 68416.m06578 importin beta-2 subunit family protein ... 34 0.086
At3g17340.1 68416.m02216 importin-related contains Pfam profile ... 34 0.086
At5g37430.1 68418.m04503 hypothetical protein contains Pfam PF04... 34 0.11
At5g63550.1 68418.m07976 expressed protein 33 0.15
At3g16750.1 68416.m02138 expressed protein ; expression supporte... 33 0.15
At3g01260.1 68416.m00032 aldose 1-epimerase family protein simil... 33 0.20
At5g23405.2 68418.m02742 high mobility group (HMG1/2) family pro... 33 0.26
At5g23405.1 68418.m02741 high mobility group (HMG1/2) family pro... 33 0.26
At4g26600.1 68417.m03834 nucleolar protein, putative similar to ... 33 0.26
At2g19480.1 68415.m02277 nucleosome assembly protein (NAP), puta... 32 0.35
At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related conta... 32 0.46
At4g16050.1 68417.m02435 expressed protein 32 0.46
At4g13380.1 68417.m02091 heavy-metal-associated domain-containin... 32 0.46
At1g11910.1 68414.m01374 aspartyl protease family protein contai... 32 0.46
At5g56950.1 68418.m07109 nucleosome assembly protein (NAP), puta... 31 0.60
At4g27310.1 68417.m03918 zinc finger (B-box type) family protein... 31 0.60
At1g49920.1 68414.m05598 zinc finger protein-related weak simila... 31 0.60
At3g53310.1 68416.m05881 transcriptional factor B3 family protei... 31 0.80
At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative simila... 31 0.80
At2g22080.1 68415.m02622 expressed protein 31 1.1
At2g11910.2 68415.m01278 expressed protein 31 1.1
At2g11910.1 68415.m01277 expressed protein 31 1.1
At5g23950.1 68418.m02812 C2 domain-containing protein similar to... 30 1.4
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 30 1.4
At2g46900.1 68415.m05857 expressed protein contains Pfam profile... 30 1.4
At5g26020.1 68418.m03096 hypothetical protein 30 1.8
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 30 1.8
At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a) ide... 30 1.8
At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a) ide... 30 1.8
At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a) ide... 30 1.8
At2g45890.1 68415.m05707 expressed protein contains Pfam profile... 30 1.8
At1g26210.1 68414.m03198 expressed protein similar to hypothetic... 30 1.8
At1g17690.1 68414.m02190 expressed protein 30 1.8
At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 29 2.4
At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 29 2.4
At4g01590.1 68417.m00207 expressed protein 29 2.4
At3g05220.2 68416.m00570 heavy-metal-associated domain-containin... 29 2.4
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 29 2.4
At1g71470.1 68414.m08259 hypothetical protein 29 2.4
At1g60640.1 68414.m06826 expressed protein 29 2.4
At1g23930.1 68414.m03019 hypothetical protein contains Pfam prof... 29 2.4
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 29 3.2
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 29 3.2
At5g60130.1 68418.m07538 transcriptional factor B3 family protei... 29 4.3
At5g11270.1 68418.m01316 expressed protein 29 4.3
At3g28960.1 68416.m03620 amino acid transporter family protein l... 29 4.3
At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putat... 29 4.3
At1g55380.1 68414.m06334 DC1 domain-containing protein contains ... 29 4.3
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 29 4.3
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 29 4.3
At5g37420.1 68418.m04502 hypothetical protein contains Pfam PF04... 28 5.6
At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PS... 28 5.6
At3g58460.1 68416.m06516 rhomboid family protein / ubiquitin-ass... 28 5.6
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 28 5.6
At2g40030.1 68415.m04919 DNA-directed RNA polymerase alpha subun... 28 5.6
At2g03820.1 68415.m00343 nonsense-mediated mRNA decay NMD3 famil... 28 5.6
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 28 5.6
At2g01820.1 68415.m00113 leucine-rich repeat protein kinase, put... 28 5.6
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 28 5.6
At1g65320.1 68414.m07407 CBS domain-containing protein contains ... 28 5.6
At1g47970.1 68414.m05343 expressed protein 28 5.6
At5g23420.1 68418.m02747 high mobility group (HMG1/2) family pro... 28 7.4
At4g26090.1 68417.m03756 disease resistance protein RPS2 (CC-NBS... 28 7.4
At4g15980.1 68417.m02426 pectinesterase family protein contains ... 28 7.4
At3g29000.1 68416.m03624 calcium-binding EF hand family protein ... 28 7.4
At3g18540.1 68416.m02358 expressed protein 28 7.4
At3g08760.1 68416.m01018 protein kinase family protein contains ... 28 7.4
At3g01320.1 68416.m00045 paired amphipathic helix repeat-contain... 28 7.4
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 28 7.4
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 28 7.4
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 28 7.4
At1g63980.1 68414.m07247 D111/G-patch domain-containing protein ... 28 7.4
At1g55600.1 68414.m06364 WRKY family transcription factor simila... 28 7.4
At1g19430.1 68414.m02421 dehydration-responsive protein-related ... 28 7.4
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 28 7.4
At5g37390.1 68418.m04498 hypothetical protein contains Pfam prof... 27 9.8
At5g16500.1 68418.m01928 protein kinase family protein contains ... 27 9.8
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 27 9.8
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 27 9.8
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 27 9.8
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 9.8
At4g12610.1 68417.m01987 transcription initiation factor IIF alp... 27 9.8
At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 27 9.8
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 27 9.8
At2g32310.1 68415.m03950 expressed protein 27 9.8
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 27 9.8
At1g68870.1 68414.m07879 hypothetical protein 27 9.8
At1g54150.1 68414.m06173 zinc finger (C3HC4-type RING finger) fa... 27 9.8
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 27 9.8
>At3g57660.1 68416.m06424 DNA-directed RNA polymerase family protein
similar to SP|O35134 DNA-directed RNA polymerase I
largest subunit (EC 2.7.7.6) (RNA polymerase I 194 kDa
subunit) (RPA194) {Mus musculus}; contains InterPro
accession IPR000722: RNA polymerase, alpha subunit
Length = 1670
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/46 (58%), Positives = 39/46 (84%)
Frame = +3
Query: 33 YTDKKKFVEVMNAKFLESMASPGEPVGLLAAQSIGEPSTQMTLNTF 170
+ +++ ++++ +KF S+A PGEPVG+LAAQS+GEPSTQMTLNTF
Sbjct: 1133 FVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTF 1178
Score = 64.9 bits (151), Expect = 5e-11
Identities = 37/106 (34%), Positives = 57/106 (53%)
Frame = +1
Query: 169 FHFAGRGDMNVTLGIPRLREIPNDCISETKTPNMDIPFLNVSDVTKKAEKLRQKLNRVTI 348
FH AGRG+MNVTLGIPRL+EI + KTP M P L + A + +L ++T+
Sbjct: 1178 FHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLLK-GKTKEDANDITDRLRKITV 1236
Query: 349 ADVLEKIDVQCEIVVXPERQLKTTMKFTFLPHKQYKTQYAVKPTQI 486
AD+++ +++ E ++ + K L YK ++ K T I
Sbjct: 1237 ADIIKSMELSVVPYTVYENEVCSIHK---LKINLYKPEHYPKHTDI 1279
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/38 (60%), Positives = 33/38 (86%)
Frame = +3
Query: 63 MNAKFLESMASPGEPVGLLAAQSIGEPSTQMTLNTFPF 176
+ ++FL+S+ +PGE +G +AAQSIGEP+TQMTLNTF +
Sbjct: 1070 IESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1107
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 169 FHFAGRGDMNVTLGIPRLREIPNDCISETKTPNMDIPFLNVSDVTKKAEKLRQ-KLNRVT 345
FH+AG NVTLG+PRLREI N KTP++ + + +K+ K Q L T
Sbjct: 1105 FHYAGVSAKNVTLGVPRLREIIN-VAKRIKTPSLSVYLTPEASKSKEGAKTVQCALEYTT 1163
Query: 346 IADVLEKIDV 375
+ V + +V
Sbjct: 1164 LRSVTQATEV 1173
>At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative
similar to SP|P04051 DNA-directed RNA polymerase III
largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae};
contains InterPro accession IPR000722: RNA polymerase,
alpha subunit
Length = 1328
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +1
Query: 169 FHFAGRGDMNVTLGIPRLREIPNDCISETKTPNMDIPFLNVSDVTKKAEKLRQKLNRVTI 348
FHFAG MN+T G+PR+ EI N TP + N ++T A ++ ++ + T+
Sbjct: 1004 FHFAGVASMNITQGVPRINEIIN-ASKNISTPVISAELENPLELT-SARWVKGRIEKTTL 1061
Query: 349 ADVLEKIDV 375
V E I+V
Sbjct: 1062 GQVAESIEV 1070
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 99 GEPVGLLAAQSIGEPSTQMTLNTFPF 176
G +G + AQSIGEP TQMTL TF F
Sbjct: 981 GTAIGTIGAQSIGEPGTQMTLKTFHF 1006
>At1g48400.1 68414.m05406 F-box family protein contains F-box domain
Pfam:PF00646
Length = 513
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 564 MWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+W S + D+DD DD + D ++D D DD+ ++DDD+
Sbjct: 274 LWVSTNDYDYSDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 322
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D ++D D DD+ ++DDD+
Sbjct: 291 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 323
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D ++D D DD+ ++DDD+
Sbjct: 292 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 324
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D ++D D DD+ ++DDD+
Sbjct: 293 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 325
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
D+DD DD + D ++D D DD+ ++D D
Sbjct: 296 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGD 327
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 591 RARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
R + +D D DD + D ++D D DD+ ++DDD+
Sbjct: 273 RLWVSTNDYDYSDDDDDDDDDDDDDDDDDDDDDDDDDDDD 312
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKI 725
++KK + + K +D DD+ + TD ++D D DD+ + DDN KI
Sbjct: 112 DEKKHKDKK-KDGHNDDDDSDDDTDDDDDDDDDDDDDDEVDGDDNEKEKI 160
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 582 KKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
KK+ K D+D+ + D N+D DS DD ++DDD+
Sbjct: 100 KKKSGGHDKDDDDEKKHKDKKKDGHNDDDDSDDDTDDDDDDDD 142
>At2g21420.1 68415.m02549 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 468
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 555 CGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDD 704
CG W Q+ + D+DD DD + D ++D D DD+ +EDD
Sbjct: 376 CGKEW--NQRGCLSPGCDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDEDD 423
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D + +DS DD+ +D+D+
Sbjct: 408 DDDDDDDDDDEDDEDDGYIDSDDDDVDGDDNDD 440
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D ++D D DD+ +D+D+
Sbjct: 391 DDDDDDDDDDDDDDDDDDDDDDDDDDDEDDEDD 423
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D ++D D DD + DDD+
Sbjct: 400 DDDDDDDDDDDDDDDDDDEDDEDDGYIDSDDDD 432
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DDA + D ++D D DDE ++DDD+
Sbjct: 96 DDDDDDDADDADDDEDDD-DEDDDEDEDDDDDD 127
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DDA + D + D D +D+ ++DD+N
Sbjct: 99 DDDDADDADDDEDDDDEDDDEDEDDDDDDDDEN 131
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 603 AKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
A DED+ +D + D ++D D +DD +EDDD+
Sbjct: 79 ADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDD 114
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSD-DEAPNEDDDN 710
D+DD DD + D A++D D D D+ +EDDD+
Sbjct: 92 DDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDD 125
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 609 SDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+D D+ +D E D ++D D DD+A + DDD
Sbjct: 77 ADADEDEDEDEDEDDDDDDDDDDDDDADDADDD 109
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
E + A + +++D DD + D ++D D +DD+ ++D+D+
Sbjct: 73 EDEDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDD 117
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
DEDD DD + D +D D +D+ +DD++
Sbjct: 88 DEDDDDDDDDDDDDDADDADDDEDDDDEDDDED 120
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 543 AKATCGVMWASEQK--KQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+ +TCG+ +E + K E DGD + + + D D+ +DE +ED+D+
Sbjct: 34 SNSTCGICRTAEDEYIKVYDDHNNDGEGDGDGDGDGDEDEDEDADADEDEDEDEDEDD 91
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTA 716
DED+ +DA D + D D DD+ ++DDD+ A
Sbjct: 70 DEDEDEDADADEDE-DEDEDEDDDDDDDDDDDDDA 103
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
DED+ DD + D ++ D+ DDE +++DD+
Sbjct: 86 DEDEDDDDDDDDDDDDDADDADDDEDDDDEDDD 118
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D + D D DD+ +++D++
Sbjct: 90 DDDDDDDDDDDDDADDADDDEDDDDEDDDEDED 122
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 603 AKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
A +DD DD E D +D D DDE E DD
Sbjct: 103 ADDADDDEDDDDEDDDEDEDDDDDDDDENDEECDD 137
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+ ++DD DD + D A++ D DD+ ++D+D
Sbjct: 87 EDEDDDDDDDDDDDDDADDADDDEDDDDEDDDED 120
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 615 EDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+ DGD+ + A+ D D +DE ++DDD+
Sbjct: 66 DGDGDEDEDEDADADEDEDEDEDEDDDDDDDD 97
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 600 AAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
A ++DD +D E D ++D D +D+E +E D +
Sbjct: 106 ADDDEDDDDEDDDEDEDDDDDDDDENDEECDDEYDSH 142
>At5g07170.1 68418.m00817 hypothetical protein
Length = 542
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 600 AAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
AA D DD DD + D ++D D DD+ ++DDD+
Sbjct: 105 AADDDADDTDDDEDDDDDDDDDDDDDDDDDDDDDDDD 141
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 570 ASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+ E+ + + +DD DD + D ++D D DD+ ++DDD+
Sbjct: 92 SDEEDDSESTHCYAADDDADDTDDDEDDDDDDDDDDDDDDDDDDDDD 138
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 603 AKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNK 734
A +DD DD + D ++D D DD+ ++DD++ +++ +
Sbjct: 110 ADDTDDDEDDDDDDDDDDDDDDDDDDDDDDDDDDESKDSEVEEE 153
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 603 AKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+ SDE+D ++ A++D D +DD+ ++DDD+
Sbjct: 90 SSSDEEDDSESTH-CYAADDDADDTDDDEDDDDDDD 124
>At3g59020.1 68416.m06578 importin beta-2 subunit family protein
similar to D-Importin 7/RanBP7 [Drosophila melanogaster]
GI:7542336; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 1112
Score = 34.3 bits (75), Expect = 0.086
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +3
Query: 582 KKQRARAAKSDED----DGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKI 725
K Q A AAK++E+ DGDD +++ + DDE P+E D +T K+
Sbjct: 962 KDQLAEAAKAEEEEEDEDGDDDDMDEFQTDDEDEDGDDENPDETDGSTLRKL 1013
>At3g17340.1 68416.m02216 importin-related contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 822
Score = 34.3 bits (75), Expect = 0.086
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 546 KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPT---DTANNDLDSSDDEAPNEDDD 707
K +M AS + K+ DEDDG+ E T +T +ND DS DE +++
Sbjct: 684 KCFVSLMEASRRLKEVNEETDDDEDDGEPGEEETESEETDSNDEDSESDECEETEEE 740
>At5g37430.1 68418.m04503 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 607
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DDGDD + D +D D D+ ++DDD+
Sbjct: 561 DDDDGDDDDDDGDDDGDDDDDDGDDGDDDDDDD 593
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DDGDD + D +D D DD+ ++ DD+
Sbjct: 568 DDDDGDDDGDDDDDDGDDGDDDDDDDGDDGDDD 600
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 615 EDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+DDGDD + D ++D D D+ ++DDD+
Sbjct: 573 DDDGDDDDDDGDDGDDDDDDDGDDGDDDDDDD 604
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 615 EDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+DDGDD + D ++D D DD+ ++DDD
Sbjct: 554 DDDGDDGDD--DDGDDDDDDGDDDGDDDDDD 582
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+ D DD + D ++D D DD+ + DDD+
Sbjct: 558 DDGDDDDGDDDDDDGDDDGDDDDDDGDDGDDDD 590
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D DDGDD D + D D DD+ +D D+
Sbjct: 556 DGDDGDDDDGDDDDDDGDDDGDDDDDDGDDGDD 588
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDE 686
D+DDGDD + D +D D DD+
Sbjct: 579 DDDDGDDGDDDDDDDGDDGDDDDDD 603
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 615 EDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+DD DD + D ++D D DD+ ++ DD
Sbjct: 566 DDDDDDGDDDGDDDDDDGDDGDDDDDDDGDD 596
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 570 ASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
A +++ + R SD ++G D + ND DD AP E+ D+
Sbjct: 273 AKRKRQTKKRDLPSDTEEGKDEGDADSEGTNDPHEEDDAAPEEESDH 319
>At3g16750.1 68416.m02138 expressed protein ; expression supported
by MPSS
Length = 194
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +3
Query: 555 CGVMWASEQKKQRARAAKSDEDD-----GDDAPEPTDTANNDLDSSDDEAPNEDDDNTA 716
C ++ + + R SD++D G+D + + N+D DSSDD+ + DDD ++
Sbjct: 112 CEQLYGTYRVVHYRRYHMSDDNDYGHNSGEDTEDSQNLGNSDNDSSDDDGSSNDDDGSS 170
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 570 ASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+ E + SD D DD ++N+D SSDDE+ + DD++
Sbjct: 139 SGEDTEDSQNLGNSDNDSSDD----DGSSNDDDGSSDDESHSSDDES 181
>At3g01260.1 68416.m00032 aldose 1-epimerase family protein similar
to non-cell-autonomous protein pathway2, plasmodesmal
receptor [Nicotiana tabacum] GI:15824567; contains Pfam
profile PF01263: Aldose 1-epimerase
Length = 378
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD +D D ++D D DD ++DDDN
Sbjct: 43 DQDDDNDGDHDDDDHDDDNDHDDDNNDHDDDDN 75
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 594 ARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
++A +D DD D + + ++D D DD+ ++DD+N
Sbjct: 30 SKANDNDHDDDDHDQDDDNDGDHDDDDHDDDNDHDDDNN 68
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D+DD DD + D NND D D+ N D D+
Sbjct: 53 DDDDHDDDNDHDDD-NNDHDDDDNNDDNNDGDD 84
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIR 728
D+D+ D + + NND D D+ N+D D+ +R
Sbjct: 64 DDDNNDHDDDDNNDDNNDGDDDHDDDNNDDGDDEKKTLR 102
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +3
Query: 606 KSDEDDGD-DAPEPTDTANNDLDSSD-DEAPNEDDDN 710
+ D++DGD D + D ++D D++D D+ N DD+N
Sbjct: 44 QDDDNDGDHDDDDHDDDNDHDDDNNDHDDDDNNDDNN 80
>At5g23405.2 68418.m02742 high mobility group (HMG1/2) family
protein contains Pfam profile PF00505: HMG (high
mobility group) box
Length = 148
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 564 MWAS---EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
MW S ++KK A +ED+ +D E + A++ D+ D+E DDDN
Sbjct: 99 MWKSMTEDEKKDYLDKAADEEDEDEDTVE--EQADDSDDAEDNEVKETDDDN 148
>At5g23405.1 68418.m02741 high mobility group (HMG1/2) family
protein contains Pfam profile PF00505: HMG (high
mobility group) box
Length = 149
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 564 MWAS---EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
MW S ++KK A +ED+ +D E + A++ D+ D+E DDDN
Sbjct: 100 MWKSMTEDEKKDYLDKAADEEDEDEDTVE--EQADDSDDAEDNEVKETDDDN 149
>At4g26600.1 68417.m03834 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}; contains Pfam profile PF01189: NOL1/NOP2/sun
family
Length = 671
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAK 722
E++++ ++ + E D + + NND D DD+ ++DDD+ A+
Sbjct: 63 EEEEENEQSDEGSESGSDLFSDGDEEGNNDSDDDDDDDDDDDDDDEDAE 111
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDE----APNEDDDNTAAKIRNK 734
D+DD DD + A + LD SD+E + D D+ +K+ K
Sbjct: 100 DDDDDDDDEDAEPLAEDFLDGSDNEEVTMGSDLDSDSGGSKLERK 144
>At2g19480.1 68415.m02277 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 379
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 615 EDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
EDD D+ E D + + D D+E +EDDD + K+
Sbjct: 307 EDDDDEIDEDDDEEDEEDDEDDEEEDDEDDDEEEEADQGKK 347
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
D +D DD + D ++ D DDE +++DD+
Sbjct: 305 DIEDDDDEIDEDDDEEDEEDDEDDEEEDDEDDD 337
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 600 AAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
A ++D+ D +D + D +++ D DDE E+DD
Sbjct: 298 AVEADDLDIEDDDDEIDEDDDEEDEEDDEDDEEEDD 333
>At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 738
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 573 SEQKKQRARAAKSDEDDGDDAPEP-TDTANNDLDSSDDEAPNEDDDNT 713
S++ K+ SDE+ DD PEP TD +++D DE + D+ +T
Sbjct: 578 SKELKEDQSVHGSDEEVEDDPPEPDTDFSDDDNKRDHDEVGSVDEQST 625
>At4g16050.1 68417.m02435 expressed protein
Length = 666
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 585 KQRARAAKSDEDDGD-DAPEPTDTANND-LDSSDDEAPN-EDDDN-TAAKIRNKR 737
K+R RA + DE + + E DT +++ D+ DDE+ EDDDN T A+ N R
Sbjct: 500 KRRKRAREDDESAAETEDDESADTEDDESADTEDDESAETEDDDNMTIAQRINSR 554
>At4g13380.1 68417.m02091 heavy-metal-associated domain-containing
protein low similarity to wound-responsive gene KED
[Nicotiana tabacum] GI:8096269; contains Pfam profile
PF00403: Heavy-metal-associated domain
Length = 195
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 564 MWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAK 722
+W ++K R R K +++ DD P D N++D P+ DD+ A+
Sbjct: 129 LWKELEEKMRKRIVKMEKEKKDDEPITKD-EENEIDRGVYMNPSSDDEKEMAR 180
>At1g11910.1 68414.m01374 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 506
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -1
Query: 368 IFSRTSAIVTLFNFCLSFSAFFVTSD-TFRKGMSML 264
I+SRT A+ + +F L FSAF +D TFR G+ L
Sbjct: 3 IYSRTVAVSLIVSFLLCFSAFAERNDGTFRVGLKKL 38
>At5g56950.1 68418.m07109 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 374
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNK 734
D DD DD E D D D D+E +ED++ +K + K
Sbjct: 307 DNDDEDDIDEDEDEDEEDEDE-DEEEDDEDEEEEVSKTKKK 346
>At4g27310.1 68417.m03918 zinc finger (B-box type) family protein
zinc-finger protein S3574, Oryza sativa, PIR3:JE0113
Length = 223
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDLDS--SDDEAPNEDDDNTAAKIRNK 734
+ D DGDDA D D D SDDE ++D+D + N+
Sbjct: 108 REDHGDGDDAESYDDDEEEDEDEEYSDDEDEDDDEDGDDEEAENQ 152
>At1g49920.1 68414.m05598 zinc finger protein-related weak
similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea
mays] GI:1857256; contains Pfam profiles PF03108: MuDR
family transposase, PF04434: SWIM zinc finger
Length = 785
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+ DED DD E D ++D + DD +EDD+
Sbjct: 751 EEDEDGDDDEEEEDDDVDDDEEDDDDVDDDEDDE 784
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+++DGDD E D +D D DD+ ++D+D+
Sbjct: 752 EDEDGDDDEEEEDDDVDD-DEEDDDDVDDDEDD 783
>At3g53310.1 68416.m05881 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 286
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 567 WASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
W S++ + +A + D D E + + ++ DDE +ED+D+
Sbjct: 102 WGSKEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVEDDDDEDEDEDEDD 149
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
DE D D E D + D D DD + +ED++
Sbjct: 127 DEKDSTDVVEDDDDEDEDEDEDDDGSFDEDEE 158
>At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative similar
to SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1171
Score = 31.1 bits (67), Expect = 0.80
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+ DEDD D+A + D ++++ +SDD+ +E+ +
Sbjct: 73 EEDEDDDDEAADEYDNISDEIRNSDDDDDDEETE 106
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+ DE++ ++ + D A ++ D+ DE N DDD+
Sbjct: 66 EDDEEEEEEDEDDDDEAADEYDNISDEIRNSDDDD 100
>At2g22080.1 68415.m02622 expressed protein
Length = 177
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
DE +GDD + D N++ D D+E +++D+
Sbjct: 110 DEPEGDDGNDDEDDDNHENDDEDEEEDEDENDD 142
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
+ DED+ DD E D + D + ++E ++DD A + KR
Sbjct: 134 EEDEDENDDGGEEDD--DEDAEVEEEEEEEDEDDEEALQPPKKR 175
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +3
Query: 618 DDGDDAPEPTDTANNDLDSSDDEAPNED----DDNTAAKIRNK 734
DDG+D + + N+D D +DE N+D DD+ A++ +
Sbjct: 115 DDGNDDEDDDNHENDDEDEEEDEDENDDGGEEDDDEDAEVEEE 157
>At2g11910.2 68415.m01278 expressed protein
Length = 168
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 609 SDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
SD++D DD D + D + +++ EDDD+ KR
Sbjct: 125 SDDEDDDDEEGDNDDEDEDNEDEEEDDDEEDDDDVRQPPSKKR 167
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 603 AKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNT 713
A D+DD DDA + D + + D ++EA EDD T
Sbjct: 84 ADEDDDDEDDANDE-DFSGGEGDEGEEEADPEDDPVT 119
>At2g11910.1 68415.m01277 expressed protein
Length = 168
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 609 SDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
SD++D DD D + D + +++ EDDD+ KR
Sbjct: 125 SDDEDDDDEEGDNDDEDEDNEDEEEDDDEEDDDDVRQPPSKKR 167
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 603 AKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNT 713
A D+DD DDA + D + + D ++EA EDD T
Sbjct: 84 ADEDDDDEDDANDE-DFSGGEGDEGEEEADPEDDPVT 119
>At5g23950.1 68418.m02812 C2 domain-containing protein similar to
cold-regulated gene SRC2 [Glycine max] GI:2055230;
contains Pfam profile PF00168: C2 domain
Length = 219
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 600 AAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDD 704
A + DEDD DD A +D D DD+ ++D+
Sbjct: 185 AVEGDEDDDDDDDAAAAAAADDDDDDDDDDDDDDE 219
>At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile PF01301
: Glycosyl hydrolases family 35
Length = 988
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNED 701
++KK++ + +EDD DD E + + D+ D E N+D
Sbjct: 775 DEKKKKEDKDEEEEDDEDDDEEEEEEDKENKDTKDMENKNQD 816
>At2g46900.1 68415.m05857 expressed protein contains Pfam profile
PF04910: Protein of unknown function, DUF654
Length = 627
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 561 VMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNK 734
V+ E K + + +E+D +++ + DL + DE P E DD T A+ +N+
Sbjct: 9 VLQEHEDSKLQKHHEEEEEEDEEESGARSSINPFDLLNDGDEDPEEIDDETIAEKKNE 66
>At5g26020.1 68418.m03096 hypothetical protein
Length = 241
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 570 ASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
A KK + SDED+ DD E D +N D DD D+DN + NKR
Sbjct: 149 AEASKKPKKVFEISDEDEDDD-DEEDDYGDNGADDVDD-----DEDNGKSSKPNKR 198
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +3
Query: 402 ETTEDHHEIHILTPQTI*DAVRCEADANYKTHAK*IFDEMFTVVRKHAKATCGVMWASEQ 581
ET + +H Q+ D R ++ K+ + + +E +K +K+ V +
Sbjct: 278 ETFDAYHNKSAEEEQSKEDRKRKKSSKRNKSEEEEVNNEDHKSKKKKSKSNTNVDQVETK 337
Query: 582 KKQ--RARAAKSDEDDGDDAPEPTD--TANNDLDSSDD 683
KK+ + + S+ DD DDA + T +LD+ DD
Sbjct: 338 KKEEHKEKTIPSNNDDDDDAEKKQKRATPKEELDAIDD 375
>At3g56860.3 68416.m06325 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
E++++ DEDDGD+ + TD + ++ EDDD+
Sbjct: 52 EEEQEEEVEDDDDEDDGDENEDQTDGNRIEAAATSGSGNQEDDDD 96
>At3g56860.2 68416.m06324 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
E++++ DEDDGD+ + TD + ++ EDDD+
Sbjct: 52 EEEQEEEVEDDDDEDDGDENEDQTDGNRIEAAATSGSGNQEDDDD 96
>At3g56860.1 68416.m06323 UBP1 interacting protein 2a (UBA2a)
identical to UBP1 interacting protein 2a [Arabidopsis
thaliana] GI:19682816; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 478
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
E++++ DEDDGD+ + TD + ++ EDDD+
Sbjct: 52 EEEQEEEVEDDDDEDDGDENEDQTDGNRIEAAATSGSGNQEDDDD 96
>At2g45890.1 68415.m05707 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 463
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
+ED +DA EP D ND+ DE ++ D A++ R
Sbjct: 57 EEDVSEDAEEPKDDVVNDVHGDGDEEDSDIDSAEDAELEMMR 98
>At1g26210.1 68414.m03198 expressed protein similar to hypothetical
protein GI:6524175 from [Arabidopsis thaliana]
Length = 148
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTA--NNDLDSSDDEAPNEDDDNTAA 719
D+DD D + D N+D D+SDD E DD+ A+
Sbjct: 41 DDDDDDTQVKEADDGYENDDGDTSDDGGDEESDDSMAS 78
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +3
Query: 579 QKKQRARAAKSD---EDDGDDAPEPTDTANNDLDSSD--DEAPNEDDDNT 713
+++QR KSD ++D +D E ++ ++DL S+D D+ DD T
Sbjct: 82 KRRQREEEGKSDTEEDEDDEDEDEEENSGSDDLSSTDGEDDKSQGDDQET 131
>At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1072
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 567 WASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
++SE+++Q A +EDD + +++ D + DEAP DD+
Sbjct: 15 YSSEEEEQVNDQANVEEDDDELEAVARSAGSDEEDVAPDEAPVSDDE 61
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 594 ARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNK 734
AR+A SDE+D AP+ +++++ +D+A +++D A+I +
Sbjct: 40 ARSAGSDEEDV--APDEAPVSDDEVVPVEDDAEEDEEDEEKAEISKR 84
>At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1069
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 567 WASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
++SE+++Q A +EDD + +++ D + DEAP DD+
Sbjct: 15 YSSEEEEQVNDQANVEEDDDELEAVARSAGSDEEDVAPDEAPVSDDE 61
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 594 ARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNK 734
AR+A SDE+D AP+ +++++ +D+A +++D A+I +
Sbjct: 40 ARSAGSDEEDV--APDEAPVSDDEVVPVEDDAEEDEEDEEKAEISKR 84
>At4g01590.1 68417.m00207 expressed protein
Length = 200
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDD 704
E+K++ + E +G+++ N D D DD+ NEDD
Sbjct: 151 EEKEEGEDDEEVVESEGEESDNGDYDQNQDFDDDDDDYNNEDD 193
>At3g05220.2 68416.m00570 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 478
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 564 MWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
M A +QKK A D++ +D + D + +D D DDE +++DD+
Sbjct: 66 MAAKDQKKSVKFADDEDDEFSEDDYDDEDFSEDDYD--DDEFDDDEDDD 112
>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 577
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 564 MWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
M A +QKK A D++ +D + D + +D D DDE +++DD+
Sbjct: 165 MAAKDQKKSVKFADDEDDEFSEDDYDDEDFSEDDYD--DDEFDDDEDDD 211
>At1g71470.1 68414.m08259 hypothetical protein
Length = 131
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 570 ASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+SE++ ++ + S EDD EP+D+ NN+ ++ EA D+
Sbjct: 14 SSEEELSDSQVSNSSEDDDSMEDEPSDSENNNGVVTETEANGIKDE 59
>At1g60640.1 68414.m06826 expressed protein
Length = 340
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 573 SEQKKQRARAAK--SDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
SEQ ++ A+ D DD D P + D+D DD + +D T K+ R
Sbjct: 34 SEQSEEEDSVAEVSEDGDDSGDDESPAAGEDADVDDGDDNSDADDYGGTLEKMSMNR 90
>At1g23930.1 68414.m03019 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 649
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 588 QRARAAKSDEDDGDDAPEPTDTANNDL---DSSDDEAPNEDDDN 710
Q A D+ D D+ P+ ++DL + DD+ ++DDDN
Sbjct: 78 QHDDGANKDDGDDDNLPQNMQDGDDDLQPQNMQDDDDDDDDDDN 121
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTA 716
D DD + P+ + ND D SDD +E++D ++
Sbjct: 369 DSDDEEYDPDCLNDNENDEDGSDDNEESENEDGSS 403
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 600 AAKSDEDDGD-DAPEPTDTANNDLDSSDDEAPNEDD 704
AAK +E D D PE D +N+ D SDD+ ++D+
Sbjct: 10 AAKLEEQKIDLDKPEVEDDDDNEDDDSDDDDKDDDE 45
>At5g60130.1 68418.m07538 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 300
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 573 SEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTA 716
S+++ Q + S ++D DD+ + +ND D DEA E DDN A
Sbjct: 106 SDEQNQASDDVLSLDEDDDDS-DYNCGEDNDSDDYADEAAVEKDDNDA 152
>At5g11270.1 68418.m01316 expressed protein
Length = 354
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 591 RARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
RA D DD D T + D+D+ DD+ N+DDDN
Sbjct: 133 RALGVGDDVDDIDLFGSVTGDVDVDVDNDDDD--NDDDDN 170
>At3g28960.1 68416.m03620 amino acid transporter family protein low
similarity to vesicular inhibitory amino acid
transporter [Mus musculus] GI:2826776; contains
INTERPRO:IPR002422 amino acid/polyamine transporter,
family II
Length = 405
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 524 KHFIEDLFCMCFIIC-VGFTAYCVL-YCLWG 438
KH ++ +CFI+C +G+T+ VL Y ++G
Sbjct: 228 KHQFNNVLLICFILCTIGYTSMAVLGYLMYG 258
>At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 313
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 597 RAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
R K DE++ D+ E + ++D D DD+ + D+
Sbjct: 275 RKLKKDEEEADEDEESEEEEDDDDDDDDDDEEEDADE 311
>At1g55380.1 68414.m06334 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 600 AAKSDEDDGDDAPEPTDTANNDLDSSD-DEAPNEDDDN 710
++ EDD DD + +D D D D + ++DDDN
Sbjct: 110 SSDESEDDDDDEKSIKEECEDDGDDDDGDSSDSDDDDN 147
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 546 KATCGVMWASEQKK---QRARAAKSDEDDGDDAPEPTDT-ANNDLDSSDDE-APNED 701
KA G+M +QK QR + D D A E T+T A N D+ +DE A +ED
Sbjct: 494 KAIAGIMSTQQQKDVPVQRDFYDEKDLKDDKKAKESTETDAENGTDAEEDEDAVSED 550
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 573 SEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
S+ K + D+DD DD E D ++D+D S + E+++
Sbjct: 631 SKPKPKSCSYYDDDDDDDDDGDEDDDDDDDDVDPSSKDIRLEEEN 675
>At5g37420.1 68418.m04502 hypothetical protein contains Pfam PF04510
: Family of unknown function (DUF577)); common family
comprised of At5g37410, At5g37400, At5g37920,
At5g37460, At5g37650, At5g37470, At5g37420, At5g37430
Length = 579
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 615 EDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
+DDGDD + D ++D D D + +D++
Sbjct: 549 DDDGDDDDDDDDDDDDDDDDGDGDGDGDDEE 579
>At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PSP)
family protein similar to SP|Q13435 Splicing factor 3B
subunit 2 (Spliceosome associated protein 145) (SAP 145)
(SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa
subunit) {Homo sapiens}; contains Pfam profiles PF04046:
PSP, PF04037: Domain of unknown function (DUF382)
Length = 584
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 582 KKQRARAAKSDEDDG--DDAPEPTDT---ANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
+K R + E+DG D++ E D N+D DS DDE +D+ N I NK+
Sbjct: 103 EKFNFREPLASEEDGTKDESEEKEDVKKKVNSDSDSDDDE---QDNQNKEKGISNKK 156
>At3g58460.1 68416.m06516 rhomboid family protein /
ubiquitin-associated (UBA)/TS-N domain-containing
protein contains Pfam profiles PF01694: Rhomboid family,
PF00627: UBA/TS-N domain
Length = 403
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 422 MVVFSCL-SGLTTISHCTSIFSRTSAIVTLFNFCLSFSAFFVTSDT 288
++VF L + ++ + H I S S LFNF + S+FF T ++
Sbjct: 182 LIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIES 227
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 597 RAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAK 722
+ ED+ D E + N+D+++ ++ +EDDD+T K
Sbjct: 8 QVGSESEDESDYEVEVNEVQNDDVNNRYLQSGSEDDDDTDTK 49
>At2g40030.1 68415.m04919 DNA-directed RNA polymerase alpha subunit
family protein contains InterPro accession IPR000722:
RNA polymerase, alpha subunit
Length = 888
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 81 ESMASPGEPVGLLAAQSIGEPSTQMTLNTFP 173
+ + GEPVG+LAA ++ P+ + L++ P
Sbjct: 770 QGLFEAGEPVGVLAATAMSNPAYKAVLDSSP 800
>At2g03820.1 68415.m00343 nonsense-mediated mRNA decay NMD3 family
protein contains Pfam profile: PF04981 NMD3 family
Length = 516
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 621 DGDDAPE-PTDTANNDLDSSDDEAPNEDDDNTAAK 722
DG+ AP P + DLD S +E ++D+D+ AA+
Sbjct: 482 DGEGAPSVPIEELLADLDLSFEEEDDDDEDDMAAE 516
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 612 DEDDGDDAPE--PTDTANNDLDSSDDEAPNEDDDNTAA 719
++DDGDD PE P + D + +E P E ++ A
Sbjct: 1158 EDDDGDDDPEEDPEEDPEEDPEEDPEEDPEECEEMDVA 1195
>At2g01820.1 68415.m00113 leucine-rich repeat protein kinase,
putative similar to protein kinase TMK1
gi|166888|gb|AAA32876; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 943
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 275 MSMLGVLVSLMQSLGISRRRGIPRVTFMSPRPAKWKGVQC 156
+S G+ S MQSL S V + +P P KW+ VQC
Sbjct: 23 LSQTGLDDSTMQSLKSSLNL-TSDVDWSNPNPCKWQSVQC 61
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +3
Query: 546 KATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNT 713
K G + + R AK D + D PE ++T++ + +D+ +D D+T
Sbjct: 4600 KNESGPSIVDKDTRSRELRAKDDGVETADEPEESNTSDKPEEGNDENVEQDDFDDT 4655
>At1g65320.1 68414.m07407 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 425
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 45 KKFVEVMNAKFLESMASPGEPVGLLAAQSIGEPSTQMTLNTFPFC 179
K+F + N K+L++ + GL +A S P+T MT + FC
Sbjct: 145 KRFSILYNGKWLKNSENSSSSSGL-SADSTNRPTTSMTSSRDKFC 188
>At1g47970.1 68414.m05343 expressed protein
Length = 198
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 615 EDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+D G++ + D ++ D DDE EDDD+
Sbjct: 32 KDVGEEVSDEDDDDGSEGDDDDDEEEEEDDDD 63
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDD 707
DED+ D D ++D D DD+ +ED+D
Sbjct: 83 DEDEEGDEDGNGDDDDDDGDDDDDDDDDEDED 114
>At5g23420.1 68418.m02747 high mobility group (HMG1/2) family
protein similar to high mobility group protein 2 HMG2
[Ipomoea nil] GI:1052956; contains Pfam profile PF00505:
HMG (high mobility group) box
Length = 241
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/54 (22%), Positives = 32/54 (59%)
Frame = +3
Query: 570 ASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRN 731
A+E K + ++ +S+ D D+ E + ++D+D ++++ ++DD+ ++ N
Sbjct: 168 AAELKAEYNKSLESN--DADEEEEDEEKQSDDVDDAEEKQVDDDDEVEEKEVEN 219
>At4g26090.1 68417.m03756 disease resistance protein RPS2
(CC-NBS-LRR class), putative domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.
identical to RPS2 (gi:13661831)
Length = 909
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 319 LRQKLNRVTIADVLEKIDVQCEIVVXPERQLKTTMKFT 432
LRQK + + DV E+ID++ V P+R+ K + FT
Sbjct: 252 LRQKRFLLLLDDVWEEIDLEKTGVPRPDRENKCKVMFT 289
>At4g15980.1 68417.m02426 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 701
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANND-LDSSDDEAPNEDDDN 710
+ED DD+P D++ N +DSS + ++ +N
Sbjct: 242 NEDSSDDSPSTVDSSENQPVDSSSENQSSDSSNN 275
>At3g29000.1 68416.m03624 calcium-binding EF hand family protein
similar to calmodulin-like MSS3 GI:9965747 from
[Arabidopsis thaliana]; contains INTERPRO:IPR002048
calcium-binding EF-hand domain
Length = 194
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEA 689
+ K + EDD DD + D ++D+D S +EA
Sbjct: 51 KNNKDQQETLTKQEDDDDDDDDDDDDDDDDIDISREEA 88
>At3g18540.1 68416.m02358 expressed protein
Length = 268
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +3
Query: 576 EQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
E K + A D D G DA N +++ + DD KI+N+R
Sbjct: 128 EDKIPKWNTATGDSDGGRDAERTRKIQNQRSNTATGDGDGGRDDERTRKIQNQR 181
>At3g08760.1 68416.m01018 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 557
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +1
Query: 343 TIADVLEKIDVQCEIVVXPE-RQLKTTMKFTFLPHKQYKTQYAVK-PTQII--KHMQNKS 510
+IAD+ +K +Q E P R + +K + +Y ++ ++ P ++ KHM S
Sbjct: 426 SIADIAQKC-LQVEPSERPTMRNIVDQLKI--IQDMKYSCRFPLREPAPVVARKHMGRSS 482
Query: 511 SMKCLRWCGSTPRPRAA*C-GPPNRRSS 591
S+ + W ++ PR++ PP RR S
Sbjct: 483 SLNTIIWTPASVPPRSSFSPSPPPRRPS 510
>At3g01320.1 68416.m00045 paired amphipathic helix repeat-containing
protein low similarity to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1378
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +3
Query: 510 FDEMFTVVRKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEA 689
F++ F V + H + S + + A A +EDD DD + + +S D
Sbjct: 974 FEDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVC 1033
Query: 690 PNEDD 704
++D
Sbjct: 1034 SQDED 1038
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 288 RVGRDKKSRETETEIEQSDYSGRSRK-D*RAMRNRCEXRETTEDHH 422
R RD + R DY GRSR D R R RE +D H
Sbjct: 211 RHSRDSEDRYGRDGNRDDDYRGRSRSVDNYGSRGRSSEREREDDGH 256
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 288 RVGRDKKSRETETEIEQSDYSGRSRK-D*RAMRNRCEXRETTEDHH 422
R RD + R DY GRSR D R R RE +D H
Sbjct: 211 RHSRDSEDRYGRDGNRDDDYRGRSRSVDNYGSRGRSSEREREDDGH 256
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 288 RVGRDKKSRETETEIEQSDYSGRSRK-D*RAMRNRCEXRETTEDHH 422
R RD + R DY GRSR D R R RE +D H
Sbjct: 211 RHSRDSEDRYGRDGNRDDDYRGRSRSVDNYGSRGRSSEREREDDGH 256
>At1g63980.1 68414.m07247 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 391
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 531 VRKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDE 686
++ K GV + E KK + D+DD DD E + + D +DD+
Sbjct: 244 IKDRPKKIAGVRY--EGKKTSFDNSDDDDDDDDDDDEEDEEEDEDESEADDD 293
>At1g55600.1 68414.m06364 WRKY family transcription factor similar
to SPF1 protein GI:484261 from [Ipomoea batatas];
contains Pfam profile: PF03106 WRKY DNA -binding domain
Length = 485
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTA 716
D++D E D + D D +DE +D+DN A
Sbjct: 230 DDEDFQYEDEDEDQYDQDQDVDEDEEEEKDEDNVA 264
>At1g19430.1 68414.m02421 dehydration-responsive protein-related low
similarity to early-responsive to dehydration stress
ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 724
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 561 VMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAA 719
V+ +Q+ + A + SD+ + +D E T++ N+ SD DD++A+
Sbjct: 134 VVVKEDQEHEEAESDDSDQSNKEDGEEGTESDGNE-GESDGNGDGSVDDSSAS 185
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 10/51 (19%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDE-------APNEDDD---NTAAKIRNK 734
DE++GDD E D ++D D DD+ + +EDDD T IR+K
Sbjct: 305 DEENGDDDIEDEDDDDDDDDDDDDDVNEMVAWSNDEDDDLGLQTKEPIRSK 355
>At5g37390.1 68418.m04498 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 628
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 609 SDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN 710
+++DDGDD P + + D D+ ++DDD+
Sbjct: 104 ANKDDGDDDNLPQNMQDGDDDNLPQNMQDDDDDD 137
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 621 DGDDAPEPTDTANNDLDSSDDEAPNEDDDNT 713
D DD+P T N L DDE E++ T
Sbjct: 561 DHDDSPRNTSMRINSLSHDDDEEEEEENHQT 591
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 609 SDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTA 716
++ +D P+ T N+ D +DE NE D+ A
Sbjct: 252 AENSSDEDEPKVLKTNNSKADKDEDEEENETSDDEA 287
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDD 704
D+DD DD E ++ +++D DSS++E E D
Sbjct: 412 DDDDSDD--ESSEESSDDDDSSEEEENGEVD 440
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAA 719
D+++ DD A ++ DS DD+ +ED++++ +
Sbjct: 1752 DDEEEDDLDRILGLAGDNSDSGDDDLSSEDNEDSVS 1787
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = -1
Query: 377 CTSI-FSRTSAIVTLFNFCLSFSAFFVTSDTFRKGMSMLGVLVSLMQSLGI--SRRRGIP 207
CT + S A L CL+F AF + K + L VSL G+ R +P
Sbjct: 123 CTGLALSFPGAPQALLQSCLTFGAFSFILEGLNKRQTALAHSVSLRHQTGLFQDHHRALP 182
Query: 206 RVTFMSPRPAKWKG 165
++ P P + KG
Sbjct: 183 -LSLALPIPEEIKG 195
>At4g12610.1 68417.m01987 transcription initiation factor IIF alpha
subunit (TFIIF-alpha) family protein low similarity to
SP|Q05913 Transcription initiation factor IIF, alpha
subunit (TFIIF-alpha) (Transcription factor 5, large
chain) (TF5A) {Drosophila melanogaster}; contains Pfam
profile PF05793: Transcription initiation factor IIF,
alpha subunit (TFIIF-alpha)
Length = 543
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDL-DSSDDEAPNEDD-DNTAAK 722
+SDEDD DD+ + +T + +S EA E+ DN AK
Sbjct: 356 ESDEDDDDDSDDEEETNYGTVTNSKQKEAAKEEPVDNAPAK 396
>At3g48710.1 68416.m05319 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL078465.1
Length = 462
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/47 (21%), Positives = 25/47 (53%)
Frame = +3
Query: 573 SEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNT 713
+++++Q + + E +G+ + ND + DD AP E+++ +
Sbjct: 235 AKRRRQAKKQEQPTETEGNGESDVGSEGTNDSNGEDDVAPEEENNKS 281
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 606 KSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTA 716
K D+DD D + N+D+ D+E P D TA
Sbjct: 66 KHDDDDDDIMESDVELDNSDVVEPDNEPPQPMGDPTA 102
>At2g32310.1 68415.m03950 expressed protein
Length = 325
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 402 ETTEDHHEIHILTPQTI*DAVRCEADANYKTHAK*IFDEMFTVVRKHAKA---TCGVMWA 572
E +DHHE ++ P + D + + + Y+ AK + E RK KA A
Sbjct: 245 ENQQDHHE-QVVPPNEL-DPLTIQRN-QYREEAKQRYFEKKRS-RKFVKAHRYESRAQTA 300
Query: 573 SEQKKQRARAAKSDEDDGDDAP 638
+++K+ R R K+D++ +D P
Sbjct: 301 AKKKRSRGRFVKNDDEFDNDPP 322
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell
cycle control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 582 KKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNKR 737
KK+ +S+++DG DA + D +DE D T + N R
Sbjct: 600 KKELLGDEESEDEDGSDASSEDNDEEEDESDEEDEEQMRIRDETETNLVNLR 651
>At1g68870.1 68414.m07879 hypothetical protein
Length = 147
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 612 DEDDGDDAPEPTDTANNDLDSSDDE----APNEDDDN 710
+EDDG E D + D D DD+ + NE DD+
Sbjct: 40 EEDDGFSVKEVDDDGDGDEDDDDDDDDDSSNNESDDS 76
>At1g54150.1 68414.m06173 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 54 VEVMNAKFLESMASPGEPVGLLAAQSIGEPSTQMT 158
++ +N+ FL++ P PVGLL + I P +T
Sbjct: 194 LQPINSSFLQAFLYPDYPVGLLDIEKILPPGKDIT 228
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 573 SEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDNTAAKIRNK 734
+ KK + A D+++ ++ D +ND D +DE +E+D +TA R +
Sbjct: 170 ASHKKVKGCFASQDKEEEEEEEYKEDDDDNDED--EDEEEDEEDKSTAHIARKR 221
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,483,092
Number of Sequences: 28952
Number of extensions: 292546
Number of successful extensions: 2173
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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